RNA–Protein interactions for RNA: ENST00000199448.8

EPDR1-201, Transcript of ependymin related 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPDR1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-201ENST00000199448 MMTAG2Q9BU76 263 aaKnown RBP22.93■■□□□ 1.26
EPDR1-201ENST00000199448 ZNHIT6Q9NWK9 470 aaKnown RBP22.93■■□□□ 1.26
EPDR1-201ENST00000199448 SALL4Q9UJQ4 1053 aa22.93■■□□□ 1.26
EPDR1-201ENST00000199448 RPS8P62241 208 aaKnown RBP22.92■■□□□ 1.26
EPDR1-201ENST00000199448 DDB1Q16531 1140 aa22.92■■□□□ 1.26
EPDR1-201ENST00000199448 DZIP1Q86YF9 867 aaKnown RBP22.92■■□□□ 1.26
EPDR1-201ENST00000199448 AFAP1L1Q8TED9 768 aa22.92■■□□□ 1.26
EPDR1-201ENST00000199448 TMEM47Q9BQJ4 181 aa22.92■■□□□ 1.26
EPDR1-201ENST00000199448 LRRC1Q9BTT6 524 aa22.92■■□□□ 1.26
EPDR1-201ENST00000199448 NFRKBQ6P4R8 1299 aa22.92■■□□□ 1.26
EPDR1-201ENST00000199448 SECISBP2LQ93073 1101 aaKnown RBP22.92■■□□□ 1.26
EPDR1-201ENST00000199448 DHTKD1Q96HY7 919 aaPredicted RBP22.92■■□□□ 1.26
EPDR1-201ENST00000199448 PURBQ96QR8 312 aaKnown RBP22.92■■□□□ 1.26
EPDR1-201ENST00000199448 SH3GLB2Q9NR46 395 aa22.92■■□□□ 1.26
EPDR1-201ENST00000199448 MKRN1Q9UHC7 482 aaKnown RBP22.92■■□□□ 1.26
EPDR1-201ENST00000199448 TSPY3P0CV98 308 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 TSPY8P0CW00 308 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 DYMQ7RTS9 669 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 CCDC42Q96M95 316 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
EPDR1-201ENST00000199448 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
EPDR1-201ENST00000199448 SLC20A2Q08357 652 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 KIF5AQ12840 1032 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 USP17L2Q6R6M4 530 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 DGKHQ86XP1 1220 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 TGFBRAP1Q8WUH2 860 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 TMEM260Q9NX78 707 aa22.91■■□□□ 1.26
EPDR1-201ENST00000199448 SRP68Q9UHB9 627 aaKnown RBP22.91■■□□□ 1.26
EPDR1-201ENST00000199448 IPO7O95373 1038 aaKnown RBP22.9■■□□□ 1.26
EPDR1-201ENST00000199448 VAV2P52735 878 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 LINC00116Q8NCU8 138 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 VIPAS39Q9H9C1 493 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 TUBBP07437 444 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 OR52Z1P0C646 297 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 NAPAP54920 295 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 TTC19Q6DKK2 380 aaPredicted RBP22.9■■□□□ 1.26
EPDR1-201ENST00000199448 POTEDQ86YR6 584 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 MAPKAPK5Q8IW41 473 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 TCP11L1Q9NUJ3 509 aa22.9■■□□□ 1.26
EPDR1-201ENST00000199448 SCN7AQ01118 1682 aa22.89■■□□□ 1.26
EPDR1-201ENST00000199448 KLRF2D3W0D1 207 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 RPS6KA5O75582 802 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 IVLP07476 585 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 EIF4A3P38919 411 aaKnown RBP22.89■■□□□ 1.25
EPDR1-201ENST00000199448 UIMC1Q96RL1 719 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 POLD4Q9HCU8 107 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 BIN2Q9UBW5 565 aaPredicted RBP22.89■■□□□ 1.25
EPDR1-201ENST00000199448 ZNF652Q9Y2D9 606 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 TXKP42681 527 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 KCTD19Q17RG1 926 aaPredicted RBP22.89■■□□□ 1.25
EPDR1-201ENST00000199448 TMC4Q7Z404 712 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 IFIH1Q9BYX4 1025 aaKnown RBP22.89■■□□□ 1.25
EPDR1-201ENST00000199448 ACBD3Q9H3P7 528 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 MMRN2Q9H8L6 949 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 SNX12Q9UMY4 172 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 PCDHA13Q9Y5I0 950 aa22.89■■□□□ 1.25
EPDR1-201ENST00000199448 TARSL2A2RTX5 802 aaKnown RBP22.88■■□□□ 1.25
EPDR1-201ENST00000199448 LRRC41Q15345 812 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 SND1Q7KZF4 910 aaKnown RBP eCLIP22.88■■□□□ 1.254e-7■■■■□ 24.8
EPDR1-201ENST00000199448 PTF1AQ7RTS3 328 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 CCDC170Q8IYT3 715 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 GJA10Q969M2 543 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 CRACR2AQ9BSW2 395 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 PALM3A6NDB9 673 aaPredicted RBP22.88■■□□□ 1.25
EPDR1-201ENST00000199448 SMCO2A6NFE2 343 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 ZPR1O75312 459 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 DNA2P51530 1060 aa22.88■■□□□ 1.25
EPDR1-201ENST00000199448 ZSCAN29Q8IWY8 852 aaPredicted RBP22.88■■□□□ 1.25
EPDR1-201ENST00000199448 KIF11P52732 1056 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 APBA1Q02410 837 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 CKAP4Q07065 602 aaKnown RBP22.87■■□□□ 1.25
EPDR1-201ENST00000199448 ZNF662Q6ZS27 426 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 EHBP1Q8NDI1 1231 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 TBCKQ8TEA7 893 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 SMARCC1Q92922 1105 aaPredicted RBP22.87■■□□□ 1.25
EPDR1-201ENST00000199448 NUDT12Q9BQG2 462 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 UBA5Q9GZZ9 404 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 SIK3Q9Y2K2 1263 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 KIAA1551Q9HCM1 1747 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 MYMKA6NI61 221 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 SPA17Q15506 151 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 MAP9Q49MG5 647 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 DNAJC21Q5F1R6 531 aaKnown RBP22.87■■□□□ 1.25
EPDR1-201ENST00000199448 MS4A14Q96JA4 679 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 ERGIC2Q96RQ1 377 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 C7orf25Q9BPX7 421 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 NUP58Q9BVL2 599 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 KANSL2Q9H9L4 492 aa22.87■■□□□ 1.25
EPDR1-201ENST00000199448 LRRC53A6NM62 1247 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 RRAGAQ7L523 313 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 AENQ8WTP8 325 aaKnown RBP22.86■■□□□ 1.25
EPDR1-201ENST00000199448 SH2D4AQ9H788 454 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 BLOC1S4Q9NUP1 217 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 BUB1O43683 1085 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 GFPT1Q06210 699 aaPredicted RBP22.86■■□□□ 1.25
EPDR1-201ENST00000199448 ZNF444Q8N0Y2 327 aaPredicted RBP22.86■■□□□ 1.25
EPDR1-201ENST00000199448 DAGLBQ8NCG7 672 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 SPATA4Q8NEY3 305 aa22.86■■□□□ 1.25
EPDR1-201ENST00000199448 NOC3LQ8WTT2 800 aaKnown RBP22.86■■□□□ 1.25
EPDR1-201ENST00000199448 TSPYL1Q9H0U9 437 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms