RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TRAF1Q13077 416 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 NOL9Q5SY16 702 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PPP4R3AQ6IN85 833 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 USP50Q70EL3 339 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PRPF38AQ8NAV1 312 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ANO3Q9BYT9 981 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZHX2Q9Y6X8 837 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 FOXN1O15353 648 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 GRIN3BO60391 1043 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ADCY5O95622 1261 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 CDC25AP30304 524 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 EPHX2P34913 555 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 KRT26Q7Z3Y9 468 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 DHX58Q96C10 678 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SLF1Q9BQI6 1058 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 TUBE1Q9UJT0 475 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 AP5Z1O43299 807 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 MTMR9Q96QG7 549 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 TANGO6Q9C0B7 1094 aa22.29■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZNF165P49910 485 aa22.28■■□□□ 1.16
TNFRSF1A-201ENST00000162749 C11orf57Q6ZUT1 292 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF1A-201ENST00000162749 CRYGNQ8WXF5 182 aa22.28■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ANO10Q9NW15 660 aa22.28■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PIK3CDO00329 1044 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZNF500O60304 480 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 CAVIN2O95810 425 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 CBX8Q9HC52 389 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZNF536O15090 1300 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SLFN14P0C7P3 912 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 HOXA13P31271 388 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 POSTNQ15063 836 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 E2F4Q16254 413 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 MCTP2Q6DN12 878 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 LDHDQ86WU2 507 aa22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 RPAP3Q9H6T3 665 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 HOOK1Q9UJC3 728 aaKnown RBP22.27■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PP2D1A8MPX8 630 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 BIN1O00499 593 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 FLOT1O75955 427 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CALCRLQ16602 461 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 KANK3Q6NY19 840 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 LUZP1Q86V48 1076 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 ZC3H15Q8WU90 426 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 RBBP6Q7Z6E9 1792 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SPDYE3A6NKU9 549 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 FOSP01100 380 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 GCFC2P16383 781 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 USP11P51784 963 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 HMGCS2P54868 508 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 VGLL4Q14135 290 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 DPCR1Q3MIW9 517 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 GRAMD1CQ8IYS0 662 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 DDX25Q9UHL0 483 aaKnown RBP22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PCDHA5Q9Y5H7 936 aa22.26■■□□□ 1.15
TNFRSF1A-201ENST00000162749 ICAM1P05362 532 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TXLNAP40222 546 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 ZRSR1Q15695 479 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TEX2Q8IWB9 1127 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 C12orf42Q96LP6 360 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 AK8Q96MA6 479 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PPP1R9AQ9ULJ8 1098 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PPP1R12BO60237 982 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PTMAP06454 111 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PRR29P0C7W0 189 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 IGSF22Q8N9C0 903 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 IQUBQ8NA54 791 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TBC1D5Q92609 795 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 AGBL1Q96MI9 1066 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SLC38A10Q9HBR0 1119 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 MRPL11Q9Y3B7 192 aaKnown RBP22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 AFG3L2Q9Y4W6 797 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SNCAIPQ9Y6H5 919 aa22.25■■□□□ 1.15
TNFRSF1A-201ENST00000162749 C19orf81C9J6K1 198 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CFBP00751 764 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SREBF1P36956 1147 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TECP42680 631 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TXKP42681 527 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 ARHGAP4P98171 946 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 KARSQ15046 597 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CEP57L1Q8IYX8 460 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PYM1Q9BRP8 204 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CCSER1Q9C0I3 900 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 ABCB11O95342 1321 aa22.24■■□□□ 1.15
TNFRSF1A-201ENST00000162749 UBA7P41226 1012 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 MAP3K9P80192 1104 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 NT5DC1Q5TFE4 455 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SH3RF1Q7Z6J0 888 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 NAP1L5Q96NT1 182 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 NAP1L4Q99733 375 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TAF1DQ9H5J8 278 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 DISC1Q9NRI5 854 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CCPG1Q9ULG6 757 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CYP3A7-CYP3A51PA0A087WV96 503 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 POTECB2RU33 542 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CYP3A7P24462 503 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 NLRP12P59046 1061 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 IQCB1Q15051 598 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PDXDC2PQ6P474 469 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 MOXD1Q6UVY6 613 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 443 ms