RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Kcna1P16388 495 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Rpl13P47963 211 aaKnown RBP14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Sec23aQ01405 765 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Mier3Q3UHF3 551 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Brd2Q7JJ13 798 aaKnown RBP14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Naa15Q80UM3 865 aaKnown RBP14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Haus1Q8BHX1 278 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Apol6B7ZC55 329 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Usp13Q5BKP2 858 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tmem132dQ76HP3 1097 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 LRWD1Q8BUI3 648 aaKnown RBP14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Epc1Q8C9X6 813 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Atxn7Q8R4I1 867 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 CpzQ8R4V4 654 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Sh3bp5lQ99LH9 392 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Mfap3lQ9D3X9 409 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tulp1Q9Z273 543 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Wdr19Q3UGF1 1341 aa14.64□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Robo1O89026 1612 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Stat3P42227 770 aaKnown RBP14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Nlrx1Q3TL44 975 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 TxlnaQ6PAM1 554 aaKnown RBP14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Galnt17Q7TT15 598 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 MlphQ91V27 590 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 CutaQ9CQ89 177 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 4921524L21RikQ9D5T2 438 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Epb41l3Q9WV92 929 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Pabpc1lA2A5N3 607 aaKnown RBP14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Eddm13E9Q7F5 164 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 P4hbP09103 509 aaKnown RBP14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tubb5P99024 444 aaKnown RBP14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Prr7Q3V0I2 269 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tob2Q9JM55 345 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Mroh9G5E8L9 891 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Cpsf2O35218 782 aaKnown RBP14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Nr2f2P43135 414 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Chp1P61022 195 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Foxn3Q499D0 457 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Depdc1bQ8BH88 529 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Dclk3Q8BWQ5 790 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Srgap2Q91Z67 1071 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 CoasyQ9DBL7 563 aa14.63□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tmem132bF7BAB2 1078 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Idh1O88844 414 aaKnown RBP14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Krt18P05784 423 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Defb15Q8R2I5 79 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Creb3l3Q91XE9 479 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Gm43738A0A0G2JEA5 862 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Eif3j1Q3UGC7 261 aaKnown RBP14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Eif3j2Q66JS6 263 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Naa35Q6PHQ8 725 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Maip1Q8BHE8 291 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 AsphQ8BSY0 741 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Apopt1Q9CQW7 192 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Sf3a3Q9D554 501 aaKnown RBP14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Rgs12Q8CGE9 1381 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Dnaaf5B9EJR8 853 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Trip13Q3UA06 432 aa14.62□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Irx2P81066 474 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tom1l2Q5SRX1 507 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Dync1li2Q6PDL0 492 aaKnown RBP14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Cdc23Q8BGZ4 597 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Rcor2Q8C796 523 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Usp33Q8R5K2 909 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Grin3bQ91ZU9 1003 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Gfpt1P47856 697 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 EgfrQ01279 1210 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 MmeQ61391 750 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Prkag3Q8BGM7 489 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tmem63cQ8CBX0 802 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Rwdd2aQ9D9S3 292 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tpcn1Q9EQJ0 817 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Dpf1Q9QX66 387 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 C5P06684 1680 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Akap2O54931 893 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Ranbp1P34022 203 aaKnown RBP14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Siah1aP61092 282 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Ccdc114Q3UX62 658 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Cep95Q8BVV7 827 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Shisa4Q8CA71 197 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Vps37cQ8R105 352 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Pstpip2Q99M15 334 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Ppef2O35385 757 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Spice1Q8C804 860 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Ulbp1Q8HWA3 334 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Sirt2Q8VDQ8 389 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Prpf6Q91YR7 941 aaKnown RBP14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Coa7Q921H9 231 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Znf394Q9Z1D9 521 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Psma7Q9Z2U0 248 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Aox3G3X982 1335 aa14.61□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 1700016G14RikA0A286YCZ6 238 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Pcdha4O88689 947 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Olfr832Q7TRG9 312 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tor4aQ8BH02 426 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Arfgap2Q99K28 520 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Adgrb1Q3UHD1 1582 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Tcp10bE9PYJ0 438 aa14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Sec31aQ3UPL0 1230 aaKnown RBP14.6□□□□□ -0.07
Pdgfra-205ENSMUST00000201711 Senp6Q6P7W0 1132 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 879.4 ms