RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CTAGE5O15320 804 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 FDX1P10109 184 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 CHMLP26374 656 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 BEX3Q00994 111 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 KCNA10Q16322 511 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 CCSAPQ6IQ19 270 aaPredicted RBP19.25■□□□□ 0.67
COLCA2-207ENST00000639470 CYB5R4Q7L1T6 521 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 MSL3Q8N5Y2 521 aaKnown RBP19.25■□□□□ 0.67
COLCA2-207ENST00000639470 ENAHQ8N8S7 591 aaPredicted RBP19.25■□□□□ 0.67
COLCA2-207ENST00000639470 KLHDC9Q8NEP7 349 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 CLEC4DQ8WXI8 215 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 RNF41Q9H4P4 317 aaPredicted RBP19.25■□□□□ 0.67
COLCA2-207ENST00000639470 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
COLCA2-207ENST00000639470 MCM3APO60318 1980 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 LAMA3Q16787 3333 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 HIP1O00291 1037 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 C6orf222P0C671 652 aaPredicted RBP19.24■□□□□ 0.67
COLCA2-207ENST00000639470 ACLYP53396 1101 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 TKFCQ3LXA3 575 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 Q7L0L9 218 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 RNF180Q86T96 592 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 TDHQ8IZJ6 230 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 PNMA1Q8ND90 353 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 ABHD16BQ9H3Z7 469 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 TNKSO95271 1327 aa19.24■□□□□ 0.67
COLCA2-207ENST00000639470 LAMA4Q16363 1823 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 A0A1W2PPC1 479 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 PQBP1O60828 265 aaKnown RBP19.23■□□□□ 0.67
COLCA2-207ENST00000639470 COL9A3Q14050 684 aaPredicted RBP19.23■□□□□ 0.67
COLCA2-207ENST00000639470 IMMTQ16891 758 aaKnown RBP19.23■□□□□ 0.67
COLCA2-207ENST00000639470 USH1GQ495M9 461 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 BADQ92934 168 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 TTC14Q96N46 770 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 ZSCAN10Q96SZ4 725 aaPredicted RBP19.23■□□□□ 0.67
COLCA2-207ENST00000639470 SENP2Q9HC62 589 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 LCTP09848 1927 aa19.23■□□□□ 0.67
COLCA2-207ENST00000639470 PTPDC1A2A3K4 754 aa19.22■□□□□ 0.67
COLCA2-207ENST00000639470 DUSP11O75319 330 aaKnown RBP19.22■□□□□ 0.67
COLCA2-207ENST00000639470 PCP11498 1178 aaKnown RBP19.22■□□□□ 0.67
COLCA2-207ENST00000639470 CALML3P27482 149 aa19.22■□□□□ 0.67
COLCA2-207ENST00000639470 C9orf50Q5SZB4 431 aa19.22■□□□□ 0.67
COLCA2-207ENST00000639470 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
COLCA2-207ENST00000639470 LRRC37A2A6NM11 1700 aa19.22■□□□□ 0.67
COLCA2-207ENST00000639470 ASGR1P07306 291 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 SMPD1P17405 629 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 EPHB4P54760 987 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 TAPT1Q6NXT6 567 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 STOX1Q6ZVD7 989 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 NOL8Q76FK4 1167 aaKnown RBP19.21■□□□□ 0.67
COLCA2-207ENST00000639470 DGKHQ86XP1 1220 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 STAG2Q8N3U4 1231 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 LBHD1Q9BQE6 289 aaPredicted RBP19.21■□□□□ 0.67
COLCA2-207ENST00000639470 UPF3AQ9H1J1 476 aaKnown RBP19.21■□□□□ 0.67
COLCA2-207ENST00000639470 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 LTBP2Q14767 1821 aa19.21■□□□□ 0.67
COLCA2-207ENST00000639470 RBAK-RBAKDNI3L0D1 243 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 CYP21A2P08686 494 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 TNFAIP2Q03169 654 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 SLC35G1Q2M3R5 365 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 IQCA1Q86XH1 822 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 STARD7Q9NQZ5 370 aa19.2■□□□□ 0.66
COLCA2-207ENST00000639470 GNEQ9Y223 722 aaKnown RBP19.2■□□□□ 0.66
COLCA2-207ENST00000639470 ALDH5A1P51649 535 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-207ENST00000639470 GJA9P57773 515 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 SEC23AQ15436 765 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 SHHQ15465 462 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 CDC37Q16543 378 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-207ENST00000639470 GNASQ5JWF2 1037 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 ADGRF4Q8IZF3 695 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 PPP1R13LQ8WUF5 828 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 ANKS1AQ92625 1134 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 PRKAG2Q9UGJ0 569 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 CTNNA3Q9UI47 895 aa19.19■□□□□ 0.66
COLCA2-207ENST00000639470 ASB14A6NK59 587 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 SGSM2O43147 1006 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 DYNC1LI2O43237 492 aaPredicted RBP19.18■□□□□ 0.66
COLCA2-207ENST00000639470 CLTBP09497 229 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 CST5P28325 142 aaPredicted RBP19.18■□□□□ 0.66
COLCA2-207ENST00000639470 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
COLCA2-207ENST00000639470 FAAP100Q0VG06 881 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 C1orf53Q5VUE5 145 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 CXCL17Q6UXB2 119 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 TLK2Q86UE8 772 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 TSEN34Q9BSV6 310 aaKnown RBP19.18■□□□□ 0.66
COLCA2-207ENST00000639470 COL20A1Q9P218 1284 aa19.18■□□□□ 0.66
COLCA2-207ENST00000639470 QRICH1Q2TAL8 776 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 LRIT3Q3SXY7 679 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 GPATCH4Q5T3I0 446 aaKnown RBP19.17■□□□□ 0.66
COLCA2-207ENST00000639470 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 VTI1AQ96AJ9 217 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 UBAC1Q9BSL1 405 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 KRT23Q9C075 422 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 GPHNQ9NQX3 736 aaPredicted RBP19.17■□□□□ 0.66
COLCA2-207ENST00000639470 RAD50Q92878 1312 aa19.17■□□□□ 0.66
COLCA2-207ENST00000639470 MOXD2PA6NHM9 499 aa19.16■□□□□ 0.66
COLCA2-207ENST00000639470 PPP1R11O60927 126 aaPredicted RBP19.16■□□□□ 0.66
COLCA2-207ENST00000639470 ANTXR2P58335 489 aa19.16■□□□□ 0.66
COLCA2-207ENST00000639470 PSMC6P62333 389 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms