RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TEX28O15482 410 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CDC45O75419 566 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 RECKO95980 971 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 POTEJP0CG39 1038 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 SCG2P13521 617 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 DNAJB2P25686 324 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CHKAP35790 457 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 VPS41P49754 854 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 GUCY2FP51841 1108 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 PDIA5Q14554 519 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 MTERF2Q49AM1 385 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 ESCO1Q5FWF5 840 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 C14orf80Q86SX3 495 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 TADA2BQ86TJ2 420 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 RASSF3Q86WH2 238 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 NBPF15Q8N660 670 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 EHBP1Q8NDI1 1231 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 EFHD2Q96C19 240 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 FAXDC2Q96IV6 333 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 TTC1Q99614 292 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 NUDT16L1Q9BRJ7 211 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 RYDENQ9NUL5 291 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 PFDN2Q9UHV9 154 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 NOB1Q9ULX3 412 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 BZW2Q9Y6E2 419 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 GPRASP1Q5JY77 1395 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC163A0A0D9SF12 145 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CASQ2O14958 399 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 EVI5O60447 810 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 MX1P20591 662 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 ACTN2P35609 894 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 COPAP53621 1224 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 RARSP54136 660 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 ARMC4Q5T2S8 1044 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 NBPF14Q5TI25 921 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 OLFM4Q6UX06 510 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 DGLUCYQ7Z3D6 616 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 STK32CQ86UX6 486 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 JPH3Q8WXH2 748 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 TSNARE1Q96NA8 513 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 DNAJC25Q9H1X3 360 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 EHMT1Q9H9B1 1298 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 PARVBQ9HBI1 364 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 DNAAF2Q9NVR5 837 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 ZNF446Q9NWS9 450 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 HOXC10Q9NYD6 342 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 C9orf78Q9NZ63 289 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 KANK1Q14678 1352 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CRYBG1Q9Y4K1 1723 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 GOLGA8IPA6NC78 632 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 GOLGA8AA7E2F4 631 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 C19orf81C9J6K1 198 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TACC1O75410 805 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 ABL1P00519 1130 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 MYZAPP0CAP1 466 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 RAB27AP51159 221 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 OLR1P78380 273 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 MTX1Q13505 466 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 SEMA3AQ14563 771 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TAF12Q16514 161 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 SKIDA1Q1XH10 827 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC38Q502W7 563 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 ARHGAP27Q6ZUM4 889 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 ZNF365Q70YC5 407 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 NLRP9Q7RTR0 991 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 VPS52Q8N1B4 723 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 ALKBH8Q96BT7 664 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 CNDP2Q96KP4 475 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TRPV6Q9H1D0 765 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 CNGB3Q9NQW8 809 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 MCM8Q9UJA3 840 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 USP54Q70EL1 1684 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TMEM131LA2VDJ0 1609 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 PTPRCP08575 1304 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 POTEB2H3BUK9 544 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 APAF1O14727 1248 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 ZBTB43O43298 467 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 C21orf2O43822 256 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 NMT2O60551 498 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 YEATS4O95619 227 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 APOA4P06727 396 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 PNMA6AP0CW24 399 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 DDX5P17844 614 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 PPP2R1AP30153 589 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 ALDH1B1P30837 517 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 PMS2P54278 862 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 GJA9P57773 515 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC44A4Q53GD3 710 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TCERG1LQ5VWI1 586 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 PDXDC1Q6P996 788 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TUBA3EQ6PEY2 450 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 TRIM50Q86XT4 487 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC170Q8IYT3 715 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 EFCAB3Q8N7B9 438 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 SLAIN1Q8ND83 568 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 LPIN2Q92539 896 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 CABS1Q96KC9 395 aa4.28□□□□□ -1.72
R3HDM1-220ENST00000628915 MRPL40Q9NQ50 206 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms