RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TMEM199Q8N511 208 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 AP5M1Q9H0R1 490 aa22.45■■□□□ 1.18
SMN2-215ENST00000628696 FOXP2O15409 715 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 ACRP10323 421 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 CSF2RAP15509 400 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 GRIN2CQ14957 1233 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 MUM1L1Q5H9M0 696 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 VPS53Q5VIR6 699 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 NSMFQ6X4W1 530 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 C16orf59Q7L2K0 433 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 EEPD1Q7L9B9 569 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 TLK2Q86UE8 772 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 FAM126BQ8IXS8 530 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 TOMM22Q9NS69 142 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 CCPG1Q9ULG6 757 aa22.44■■□□□ 1.18
SMN2-215ENST00000628696 ASTN1O14525 1302 aa22.43■■□□□ 1.18
SMN2-215ENST00000628696 DYNC1LI2O43237 492 aaPredicted RBP22.43■■□□□ 1.18
SMN2-215ENST00000628696 PTGS1P23219 599 aa22.43■■□□□ 1.18
SMN2-215ENST00000628696 TMEM240Q5SV17 173 aa22.43■■□□□ 1.18
SMN2-215ENST00000628696 TIFAQ96CG3 184 aa22.43■■□□□ 1.18
SMN2-215ENST00000628696 PDGFCQ9NRA1 345 aa22.43■■□□□ 1.18
SMN2-215ENST00000628696 GNEQ9Y223 722 aaKnown RBP22.43■■□□□ 1.18
SMN2-215ENST00000628696 GRXCR1A8MXD5 290 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 SMPD1P17405 629 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 CYP2C18P33260 490 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 NKX3-2P78367 333 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 FSCN1Q16658 493 aaKnown RBP22.42■■□□□ 1.18
SMN2-215ENST00000628696 RRP12Q5JTH9 1297 aaKnown RBP22.42■■□□□ 1.18
SMN2-215ENST00000628696 ZNF365Q70YC5 407 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 FBXO16Q8IX29 292 aaPredicted RBP22.42■■□□□ 1.18
SMN2-215ENST00000628696 EVI5LQ96CN4 794 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 ZNF576Q9H609 170 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 CYP39A1Q9NYL5 469 aa22.42■■□□□ 1.18
SMN2-215ENST00000628696 ZEB2O60315 1214 aa22.41■■□□□ 1.18
SMN2-215ENST00000628696 TTBK2Q6IQ55 1244 aa22.41■■□□□ 1.18
SMN2-215ENST00000628696 PURBQ96QR8 312 aaKnown RBP22.41■■□□□ 1.18
SMN2-215ENST00000628696 ANAPC4Q9UJX5 808 aa22.41■■□□□ 1.18
SMN2-215ENST00000628696 EYSQ5T1H1 3165 aa22.41■■□□□ 1.18
SMN2-215ENST00000628696 CABYRO75952 493 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 CD4P01730 458 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 SLC16A2P36021 539 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 PBX2P40425 430 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 ITGA7Q13683 1181 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 IQSEC1Q6DN90 963 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 PSRC1Q6PGN9 363 aaPredicted RBP22.4■■□□□ 1.18
SMN2-215ENST00000628696 DCAF4Q8WV16 495 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 HELLSQ9NRZ9 838 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 LRRC37A2A6NM11 1700 aa22.4■■□□□ 1.18
SMN2-215ENST00000628696 SALL3Q9BXA9 1300 aa22.39■■□□□ 1.18
SMN2-215ENST00000628696 CDH23Q9H251 3354 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 ORC4O43929 436 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 ICAM1P05362 532 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 TMEM63BQ5T3F8 832 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 TAPT1Q6NXT6 567 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 KIAA1211Q6ZU35 1233 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 HIPK3Q9H422 1215 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 GPCPD1Q9NPB8 672 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 IL23AQ9NPF7 189 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 LCTP09848 1927 aa22.39■■□□□ 1.17
SMN2-215ENST00000628696 FRMPD2Q68DX3 1309 aaPredicted RBP22.38■■□□□ 1.17
SMN2-215ENST00000628696 BAATQ14032 418 aaPredicted RBP22.38■■□□□ 1.17
SMN2-215ENST00000628696 ALX1Q15699 326 aa22.38■■□□□ 1.17
SMN2-215ENST00000628696 SYDE2Q5VT97 1194 aa22.38■■□□□ 1.17
SMN2-215ENST00000628696 SLC43A3Q8NBI5 491 aa22.38■■□□□ 1.17
SMN2-215ENST00000628696 FAM227BQ96M60 508 aa22.38■■□□□ 1.17
SMN2-215ENST00000628696 PBX4Q9BYU1 374 aa22.38■■□□□ 1.17
SMN2-215ENST00000628696 RANBP17Q9H2T7 1088 aaKnown RBP22.38■■□□□ 1.17
SMN2-215ENST00000628696 VTA1Q9NP79 307 aa22.38■■□□□ 1.17
SMN2-215ENST00000628696 GRIN2DO15399 1336 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 FGAP02671 866 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 TOP1P11387 765 aaKnown RBP22.37■■□□□ 1.17
SMN2-215ENST00000628696 NOVP48745 357 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 PSMC6P62333 389 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 MCMDC2Q4G0Z9 681 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 RASIP1Q5U651 963 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 TMEM47Q9BQJ4 181 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 TRPV6Q9H1D0 765 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 ADD3Q9UEY8 706 aaKnown RBP22.37■■□□□ 1.17
SMN2-215ENST00000628696 PRUNE2Q8WUY3 3088 aa22.37■■□□□ 1.17
SMN2-215ENST00000628696 UMODL1Q5DID0 1318 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 PTPDC1A2A3K4 754 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 FGBP02675 491 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 FGRP09769 529 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 PDE1AP54750 535 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 CCL23P55773 120 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 RRP1P56182 461 aaKnown RBP22.36■■□□□ 1.17
SMN2-215ENST00000628696 CRBNQ96SW2 442 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 Q9Y3F1 56 aa22.36■■□□□ 1.17
SMN2-215ENST00000628696 A0A0D9SFI3 127 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 NFIBO00712 420 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 HAND2P61296 217 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 BTNL9Q6UXG8 535 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 USP38Q8NB14 1042 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 PPM1EQ8WY54 764 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 HERVK_113Q902F9 699 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 GAS2L1Q99501 681 aaPredicted RBP22.35■■□□□ 1.17
SMN2-215ENST00000628696 MTIF3Q9H2K0 278 aaKnown RBP22.35■■□□□ 1.17
SMN2-215ENST00000628696 MSRAQ9UJ68 235 aa22.35■■□□□ 1.17
SMN2-215ENST00000628696 B4GALT4O60513 344 aa22.34■■□□□ 1.17
SMN2-215ENST00000628696 CALML3P27482 149 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms