RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 CSGALNACT2Q8N6G5 542 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 C7orf25Q9BPX7 421 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 JAG2Q9Y219 1238 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 REXO2Q9Y3B8 237 aaKnown RBP21.49■■□□□ 1.03
PTBP1-220ENST00000627714 KLRF2D3W0D1 207 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 RASA1P20936 1047 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 P2RX5Q93086 422 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 TUBGCP2Q9BSJ2 902 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 ZNHIT6Q9NWK9 470 aaKnown RBP21.49■■□□□ 1.03
PTBP1-220ENST00000627714 ANKIB1Q9P2G1 1089 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 PES1O00541 588 aaKnown RBP21.48■■□□□ 1.03
PTBP1-220ENST00000627714 PLCG1P19174 1290 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 CYLC1P35663 651 aaPredicted RBP21.48■■□□□ 1.03
PTBP1-220ENST00000627714 NAPAP54920 295 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 CCDC170Q8IYT3 715 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 TGFBRAP1Q8WUH2 860 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 PNKPQ96T60 521 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 TRIM9Q9C026 710 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 ABL1P00519 1130 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 GRAPQ13588 217 aa21.48■■□□□ 1.03
PTBP1-220ENST00000627714 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
PTBP1-220ENST00000627714 ERICH4A6NGS2 130 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 GNPATO15228 680 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 FIGNQ5HY92 759 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 TRAPPC11Q7Z392 1133 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 NEK8Q86SG6 692 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 RRP36Q96EU6 259 aaKnown RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 RPGRIP1Q96KN7 1286 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 DUSP9Q99956 384 aaKnown RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 TTYH3Q9C0H2 523 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 GUCA1BQ9UMX6 200 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 hCG_1984214I3L0E3 225 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 KRT86O43790 486 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 IPO7O95373 1038 aaKnown RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 HOXA7P31268 230 aaPredicted RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 ZBED6P86452 979 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 PDE4DQ08499 809 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 WDR93Q6P2C0 686 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 WDR59Q6PJI9 974 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 C16orf86Q6ZW13 317 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 ZNF713Q8N859 430 aaPredicted RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 PSD3Q9NYI0 1048 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 SEC63Q9UGP8 760 aaKnown RBP21.47■■□□□ 1.03
PTBP1-220ENST00000627714 L1RE1Q9UN81 338 aa21.47■■□□□ 1.03
PTBP1-220ENST00000627714 TNRC6CQ9HCJ0 1690 aaKnown RBP21.46■■□□□ 1.03
PTBP1-220ENST00000627714 B4DLN1 442 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 CCNT1O60563 726 aaKnown RBP21.46■■□□□ 1.03
PTBP1-220ENST00000627714 TRIM21P19474 475 aaKnown RBP21.46■■□□□ 1.03
PTBP1-220ENST00000627714 MCM3P25205 808 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 KCNQ4P56696 695 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 SOGA3Q5TF21 947 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 CNNM4Q6P4Q7 775 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 NEDD1Q8NHV4 660 aa21.46■■□□□ 1.03
PTBP1-220ENST00000627714 A0A1W2PQJ5 194 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 ESYT2A0FGR8 921 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 PLCG2P16885 1265 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 CDK17Q00537 523 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 DIXDC1Q155Q3 683 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 LETM2Q2VYF4 491 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 EXOC4Q96A65 974 aa21.45■■□□□ 1.03
PTBP1-220ENST00000627714 RTFDC1Q9BY42 306 aaPredicted RBP21.45■■□□□ 1.03
PTBP1-220ENST00000627714 SNED1Q8TER0 1413 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 EIF3CLB5ME19 914 aaKnown RBP21.45■■□□□ 1.02
PTBP1-220ENST00000627714 HERVK_113P62684 666 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 ASIC1P78348 528 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 TBC1D8BQ0IIM8 1120 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 CCDC122Q5T0U0 273 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 PAPD7Q5XG87 772 aaKnown RBP21.45■■□□□ 1.02
PTBP1-220ENST00000627714 ZSCAN29Q8IWY8 852 aaPredicted RBP21.45■■□□□ 1.02
PTBP1-220ENST00000627714 SLC44A5Q8NCS7 719 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 CALML4Q96GE6 196 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 CNOT6LQ96LI5 555 aaKnown RBP21.45■■□□□ 1.02
PTBP1-220ENST00000627714 EYA3Q99504 573 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 PLIN2Q99541 437 aa21.45■■□□□ 1.02
PTBP1-220ENST00000627714 EIF3CQ99613 913 aaKnown RBP21.45■■□□□ 1.02
PTBP1-220ENST00000627714 DDX60LQ5H9U9 1706 aaKnown RBP21.45■■□□□ 1.02
PTBP1-220ENST00000627714 KIAA1328Q86T90 577 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 MAPKAPK5Q8IW41 473 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 ERGIC2Q96RQ1 377 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 ACBD3Q9H3P7 528 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 NUTM2BA6NNL0 878 aaPredicted RBP21.44■■□□□ 1.02
PTBP1-220ENST00000627714 NUTM2EB1AL46 878 aaPredicted RBP21.44■■□□□ 1.02
PTBP1-220ENST00000627714 RHOXF2BP0C7M4 288 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 CDK8P49336 464 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 CKAP4Q07065 602 aaKnown RBP21.44■■□□□ 1.02
PTBP1-220ENST00000627714 LRRC15Q8TF66 581 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 RHOXF2Q9BQY4 288 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 ABCB6Q9NP58 842 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 SAR1BQ9Y6B6 198 aa21.44■■□□□ 1.02
PTBP1-220ENST00000627714 ANO9A1A5B4 782 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 GOLGA8HP0CJ92 632 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 MTIF2P46199 727 aaKnown RBP21.43■■□□□ 1.02
PTBP1-220ENST00000627714 VSNL1P62760 191 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 FAM98CQ17RN3 349 aaKnown RBP21.43■■□□□ 1.02
PTBP1-220ENST00000627714 FKBP15Q5T1M5 1219 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 ANKRD40Q6AI12 368 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 SMIM5Q71RC9 77 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms