RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 GPCPD1Q9NPB8 672 aa22.6■■□□□ 1.21
ATG4B-226ENST00000625810 FRMPD2Q68DX3 1309 aaPredicted RBP22.59■■□□□ 1.21
ATG4B-226ENST00000625810 A0A0C4DFX4 3053 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 SOWAHBA6NEL2 793 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 MUM1L1Q5H9M0 696 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 SYDE2Q5VT97 1194 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 CWC27Q6UX04 472 aaKnown RBP22.59■■□□□ 1.21
ATG4B-226ENST00000625810 NSMFQ6X4W1 530 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 NOL8Q76FK4 1167 aaKnown RBP22.59■■□□□ 1.21
ATG4B-226ENST00000625810 PCSK9Q8NBP7 692 aaKnown RBP22.59■■□□□ 1.21
ATG4B-226ENST00000625810 VTI1AQ96AJ9 217 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 FAM161BQ96MY7 647 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 TTC14Q96N46 770 aa22.59■■□□□ 1.21
ATG4B-226ENST00000625810 UPF3AQ9H1J1 476 aaKnown RBP22.59■■□□□ 1.21
ATG4B-226ENST00000625810 HIP1O00291 1037 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 ZNF213O14771 459 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 ICAM1P05362 532 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 EPHB4P54760 987 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 FAAP100Q0VG06 881 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 BTNL9Q6UXG8 535 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 GLT1D1Q96MS3 346 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 TOX2Q96NM4 488 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 RANBP17Q9H2T7 1088 aaKnown RBP22.58■■□□□ 1.21
ATG4B-226ENST00000625810 TMEM39AQ9NV64 488 aa22.58■■□□□ 1.21
ATG4B-226ENST00000625810 DCDC2CA8MYV0 355 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 RAG1P15918 1043 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 GJA9P57773 515 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 GNASQ5JWF2 1037 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 ZNF697Q5TEC3 545 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 TBC1D10CQ8IV04 446 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 ESR2Q92731 530 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 CYP39A1Q9NYL5 469 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 CUL9Q8IWT3 2517 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 LRRC37A2A6NM11 1700 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 ASTN1O14525 1302 aa22.57■■□□□ 1.2
ATG4B-226ENST00000625810 DLL1O00548 723 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 CTAGE5O15320 804 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 ASGR1P07306 291 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 PDHBP11177 359 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 TNFAIP2Q03169 654 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 SUPT16HQ9Y5B9 1047 aaKnown RBP22.56■■□□□ 1.2
ATG4B-226ENST00000625810 CDH23Q9H251 3354 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 ELP1O95163 1332 aa22.56■■□□□ 1.2
ATG4B-226ENST00000625810 SMAD3P84022 425 aaKnown RBP22.55■■□□□ 1.2
ATG4B-226ENST00000625810 ZKSCAN3Q9BRR0 538 aa22.55■■□□□ 1.2
ATG4B-226ENST00000625810 DDX49Q9Y6V7 483 aaKnown RBP22.55■■□□□ 1.2
ATG4B-226ENST00000625810 UNC80Q8N2C7 3258 aa22.55■■□□□ 1.2
ATG4B-226ENST00000625810 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.54■■□□□ 1.2
ATG4B-226ENST00000625810 CDK7P50613 346 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 NKX3-2P78367 333 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 FPGSQ05932 587 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 EEPD1Q7L9B9 569 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 TBX21Q9UL17 535 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 PNMA2Q9UL42 364 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 NEDD4P46934 1319 aa22.54■■□□□ 1.2
ATG4B-226ENST00000625810 ZNF543Q08ER8 600 aa22.53■■□□□ 1.2
ATG4B-226ENST00000625810 BAATQ14032 418 aaPredicted RBP22.53■■□□□ 1.2
ATG4B-226ENST00000625810 CCDC178Q5BJE1 867 aa22.53■■□□□ 1.2
ATG4B-226ENST00000625810 IQCA1Q86XH1 822 aa22.53■■□□□ 1.2
ATG4B-226ENST00000625810 RNPC3Q96LT9 517 aaKnown RBP22.53■■□□□ 1.2
ATG4B-226ENST00000625810 AP5M1Q9H0R1 490 aa22.53■■□□□ 1.2
ATG4B-226ENST00000625810 ADD3Q9UEY8 706 aaKnown RBP22.53■■□□□ 1.2
ATG4B-226ENST00000625810 MROH7Q68CQ1 1323 aa22.53■■□□□ 1.2
ATG4B-226ENST00000625810 A0A0U1RQG5 324 aaPredicted RBP22.52■■□□□ 1.2
ATG4B-226ENST00000625810 PTPDC1A2A3K4 754 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 NT5C2P49902 561 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 BEX3Q00994 111 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 IQSEC1Q6DN90 963 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 DGKHQ86XP1 1220 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 PURBQ96QR8 312 aaKnown RBP22.52■■□□□ 1.2
ATG4B-226ENST00000625810 SEMA6BQ9H3T3 888 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 GNEQ9Y223 722 aaKnown RBP22.52■■□□□ 1.2
ATG4B-226ENST00000625810 LCTP09848 1927 aa22.52■■□□□ 1.2
ATG4B-226ENST00000625810 NFIBO00712 420 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 DYNC1LI2O43237 492 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-226ENST00000625810 KDM4AO75164 1064 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 TIMP1P01033 207 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 IMMTQ16891 758 aaKnown RBP22.51■■□□□ 1.19
ATG4B-226ENST00000625810 TLK2Q86UE8 772 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 FBXO16Q8IX29 292 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-226ENST00000625810 CDX2Q99626 313 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-226ENST00000625810 DSCC1Q9BVC3 393 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 TTYH1Q9H313 450 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-226ENST00000625810 PDGFCQ9NRA1 345 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 CTNNA3Q9UI47 895 aa22.51■■□□□ 1.19
ATG4B-226ENST00000625810 ARVCFO00192 962 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 ZEB2O60315 1214 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 SNHG28P0DPA3 235 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 SMPD1P17405 629 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 PTGS1P23219 599 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 GPATCH4Q5T3I0 446 aaKnown RBP22.5■■□□□ 1.19
ATG4B-226ENST00000625810 KIAA1211Q6ZU35 1233 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 FAM126BQ8IXS8 530 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 KAT14Q9H8E8 782 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 VTA1Q9NP79 307 aa22.5■■□□□ 1.19
ATG4B-226ENST00000625810 B4E1Z4 1266 aa22.49■■□□□ 1.19
ATG4B-226ENST00000625810 TLR3O15455 904 aaKnown RBP22.49■■□□□ 1.19
ATG4B-226ENST00000625810 GOLGA8HP0CJ92 632 aa22.49■■□□□ 1.19
ATG4B-226ENST00000625810 CALML3P27482 149 aa22.49■■□□□ 1.19
ATG4B-226ENST00000625810 ALDH5A1P51649 535 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms