RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SMYD4Q8IYR2 804 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-235ENST00000616973 IGSF22Q8N9C0 903 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
NR1H3-235ENST00000616973 YDJCA8MPS7 323 aa17.73■□□□□ 0.43
NR1H3-235ENST00000616973 KIF2AO00139 706 aaPredicted RBP17.73■□□□□ 0.43
NR1H3-235ENST00000616973 PPIP5K2O43314 1243 aa17.73■□□□□ 0.43
NR1H3-235ENST00000616973 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
NR1H3-235ENST00000616973 RASSF8Q8NHQ8 419 aa17.73■□□□□ 0.43
NR1H3-235ENST00000616973 CUL5Q93034 780 aa17.73■□□□□ 0.43
NR1H3-235ENST00000616973 GLT8D2Q9H1C3 349 aa17.73■□□□□ 0.43
NR1H3-235ENST00000616973 CTNND2Q9UQB3 1225 aa17.73■□□□□ 0.43
NR1H3-235ENST00000616973 FXR2P51116 673 aaKnown RBP eCLIP17.72■□□□□ 0.43
NR1H3-235ENST00000616973 MRPL12P52815 198 aaKnown RBP17.72■□□□□ 0.43
NR1H3-235ENST00000616973 STX17P56962 302 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 PAK1Q13153 545 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 HSP90AA4PQ58FG1 418 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 USP17L10C9JJH3 530 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 CCP110O43303 1012 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 EDIL3O43854 480 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 KLRC4O43908 158 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 POTEAQ6S8J7 498 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 KCTD1Q719H9 257 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 FCHSD1Q86WN1 690 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 RTKN2Q8IZC4 609 aa17.72■□□□□ 0.43
NR1H3-235ENST00000616973 GTPBP4Q9BZE4 634 aaKnown RBP17.72■□□□□ 0.43
NR1H3-235ENST00000616973 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
NR1H3-235ENST00000616973 RHOBTB3O94955 611 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 TUBB4AP04350 444 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 SLURP2P0DP57 97 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 PLCG1P19174 1290 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 SLC16A2P36021 539 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 SPAG1Q07617 926 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 CCDC93Q567U6 631 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 CEP135Q66GS9 1140 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 SLFN13Q68D06 897 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 GMCL1P1Q8NEA9 526 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 PSMD1Q99460 953 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
NR1H3-235ENST00000616973 SYNPO2Q9UMS6 1093 aa17.71■□□□□ 0.43
NR1H3-235ENST00000616973 LRRC10BA6NIK2 292 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 FAM196BA6NMK8 535 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 RIOK3O14730 519 aaKnown RBP17.7■□□□□ 0.42
NR1H3-235ENST00000616973 C21orf2O43822 256 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 PBX1P40424 430 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 TECP42680 631 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 PDIA5Q14554 519 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 CALCRLQ16602 461 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 ABCB5Q2M3G0 1257 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 FILIP1LQ4L180 1135 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 ADSSL1Q8N142 457 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 LRRC15Q8TF66 581 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 NELFBQ8WX92 580 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 PRMT6Q96LA8 375 aaPredicted RBP17.7■□□□□ 0.42
NR1H3-235ENST00000616973 NAP1L4Q99733 375 aaKnown RBP17.7■□□□□ 0.42
NR1H3-235ENST00000616973 C7orf25Q9BPX7 421 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 MMTAG2Q9BU76 263 aaKnown RBP17.7■□□□□ 0.42
NR1H3-235ENST00000616973 LIMA1Q9UHB6 759 aaKnown RBP17.7■□□□□ 0.42
NR1H3-235ENST00000616973 PRCPP42785 496 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 SLC1A4P43007 532 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 ICA1Q05084 483 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 SEPT2Q15019 361 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 TMEM266Q2M3C6 531 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 TMEM139Q8IV31 216 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 UBE2Q2Q8WVN8 375 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 CALML4Q96GE6 196 aa17.7■□□□□ 0.42
NR1H3-235ENST00000616973 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
NR1H3-235ENST00000616973 GCFC2P16383 781 aaKnown RBP17.69■□□□□ 0.42
NR1H3-235ENST00000616973 AMPD3Q01432 767 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
NR1H3-235ENST00000616973 TC2NQ8N9U0 490 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 GIMAP8Q8ND71 665 aaPredicted RBP17.69■□□□□ 0.42
NR1H3-235ENST00000616973 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 PPP1R13BQ96KQ4 1090 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 RAB34Q9BZG1 259 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 PSTPIP2Q9H939 334 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 TRMT1Q9NXH9 659 aaKnown RBP17.69■□□□□ 0.42
NR1H3-235ENST00000616973 STK17AQ9UEE5 414 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
NR1H3-235ENST00000616973 H7C1D1 291 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 ARHGAP6O43182 974 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 SLC37A4O43826 429 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 TXKP42681 527 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 QRICH1Q2TAL8 776 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 CCDC47Q96A33 483 aaKnown RBP17.68■□□□□ 0.42
NR1H3-235ENST00000616973 LRWD1Q9UFC0 647 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
NR1H3-235ENST00000616973 STX10O60499 249 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 TDP2O95551 362 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 VIL1P09327 827 aaKnown RBP17.68■□□□□ 0.42
NR1H3-235ENST00000616973 PPP1R2P41236 205 aa17.68■□□□□ 0.42
NR1H3-235ENST00000616973 STIM1Q13586 685 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms