RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 NUP133Q8WUM0 1156 aa16.81■□□□□ 0.28
TUBE1-208ENST00000604743 PURBQ96QR8 312 aaKnown RBP16.81■□□□□ 0.28
TUBE1-208ENST00000604743 LRRC2Q9BYS8 371 aa16.81■□□□□ 0.28
TUBE1-208ENST00000604743 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
TUBE1-208ENST00000604743 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
TUBE1-208ENST00000604743 SYNGAP1Q96PV0 1343 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 SOWAHBA6NEL2 793 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 ZNF865P0CJ78 1059 aaPredicted RBP16.8■□□□□ 0.28
TUBE1-208ENST00000604743 CALML3P27482 149 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 BAATQ14032 418 aaPredicted RBP16.8■□□□□ 0.28
TUBE1-208ENST00000604743 QRICH1Q2TAL8 776 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 ARMCX2Q7L311 632 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 ZNF467Q7Z7K2 595 aaPredicted RBP16.8■□□□□ 0.28
TUBE1-208ENST00000604743 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 MSL3Q8N5Y2 521 aaKnown RBP16.8■□□□□ 0.28
TUBE1-208ENST00000604743 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.8■□□□□ 0.28
TUBE1-208ENST00000604743 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
TUBE1-208ENST00000604743 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
TUBE1-208ENST00000604743 WDR19Q8NEZ3 1342 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 RARBP10826 455 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 AKR1A1P14550 325 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 ACVR2BQ13705 512 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 GRM4Q14833 912 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
TUBE1-208ENST00000604743 MYL10Q9BUA6 226 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 PNMA2Q9UL42 364 aa16.79■□□□□ 0.28
TUBE1-208ENST00000604743 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-208ENST00000604743 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 ASB14A6NK59 587 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-208ENST00000604743 EVI5O60447 810 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 SLC30A10Q6XR72 485 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 RNF207Q6ZRF8 634 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 EEPD1Q7L9B9 569 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 FBXO11Q86XK2 927 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 ARRDC4Q8NCT1 418 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 NEK1Q96PY6 1258 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 SENP6Q9GZR1 1112 aaPredicted RBP16.78■□□□□ 0.28
TUBE1-208ENST00000604743 ABHD16BQ9H3Z7 469 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 FAM184BQ9ULE4 1060 aa16.78■□□□□ 0.28
TUBE1-208ENST00000604743 ASTN1O14525 1302 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 KBTBD13C9JR72 458 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 H0YGN5 161 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 PGK1P00558 417 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 TROAPQ12815 778 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 RAB11FIP4Q86YS3 637 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 PIBF1Q8WXW3 757 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 TCEANC2Q96MN5 208 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 XPNPEP3Q9NQH7 507 aa16.77■□□□□ 0.28
TUBE1-208ENST00000604743 ABCB11O95342 1321 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 DNM1LO00429 736 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 RXRAP19793 462 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
TUBE1-208ENST00000604743 LRRC41Q15345 812 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 CCDC144BQ3MJ40 725 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 C7orf61Q8IZ16 206 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
TUBE1-208ENST00000604743 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 PIGSQ96S52 555 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 NR2E3Q9Y5X4 410 aa16.76■□□□□ 0.27
TUBE1-208ENST00000604743 COL6A1P12109 1028 aa16.75■□□□□ 0.27
TUBE1-208ENST00000604743 ALDH5A1P51649 535 aaPredicted RBP16.75■□□□□ 0.27
TUBE1-208ENST00000604743 ATN1P54259 1190 aaPredicted RBP16.75■□□□□ 0.27
TUBE1-208ENST00000604743 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
TUBE1-208ENST00000604743 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
TUBE1-208ENST00000604743 TMTC2Q8N394 836 aa16.75■□□□□ 0.27
TUBE1-208ENST00000604743 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
TUBE1-208ENST00000604743 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
TUBE1-208ENST00000604743 AMNQ9BXJ7 453 aa16.75■□□□□ 0.27
TUBE1-208ENST00000604743 ADD3Q9UEY8 706 aaKnown RBP16.75■□□□□ 0.27
TUBE1-208ENST00000604743 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
TUBE1-208ENST00000604743 LRRC37A2A6NM11 1700 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 ZBTB5O15062 677 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 DDAH1O94760 285 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 REC8O95072 547 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 KRT32Q14532 448 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 RNF180Q86T96 592 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 FBXO16Q8IX29 292 aaPredicted RBP16.74■□□□□ 0.27
TUBE1-208ENST00000604743 KATNBL1Q9H079 304 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
TUBE1-208ENST00000604743 DNAH12Q6ZR08 3092 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.73■□□□□ 0.27
TUBE1-208ENST00000604743 ADCY6O43306 1168 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 CYTH3O43739 400 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
TUBE1-208ENST00000604743 CFBP00751 764 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 CPA1P15085 419 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 KIF5BP33176 963 aa16.73■□□□□ 0.27
TUBE1-208ENST00000604743 HSPA4P34932 840 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms