RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 OTOFQ9HC10 1997 aa20.53■□□□□ 0.88
VRK3-225ENST00000601912 ZBED4O75132 1171 aa20.52■□□□□ 0.88
VRK3-225ENST00000601912 CLK2P49760 499 aaKnown RBP20.52■□□□□ 0.88
VRK3-225ENST00000601912 OTUD5Q96G74 571 aa20.52■□□□□ 0.88
VRK3-225ENST00000601912 CLMNQ96JQ2 1002 aa20.52■□□□□ 0.88
VRK3-225ENST00000601912 TMEM260Q9NX78 707 aa20.52■□□□□ 0.88
VRK3-225ENST00000601912 ABCB11O95342 1321 aa20.52■□□□□ 0.87
VRK3-225ENST00000601912 USP17L15C9J2P7 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L13C9JLJ4 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L11C9JVI0 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L18D6R9N7 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L22D6RA61 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L17D6RBQ6 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L19D6RCP7 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L20D6RJB6 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 CXCL11O14625 94 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 CUTAO60888 179 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 ICAM1P05362 532 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 FKBP1BP68106 108 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 USP17L24Q0WX57 530 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 UBE2SQ16763 222 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 LDLRAD1Q5T700 205 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 CCDC73Q6ZRK6 1079 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 NEK8Q86SG6 692 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 TBCKQ8TEA7 893 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
VRK3-225ENST00000601912 SLC38A10Q9HBR0 1119 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 MCM7P33993 719 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 PPIL2Q13356 520 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 AP3B2Q13367 1082 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 COG2Q14746 738 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 AXDND1Q5T1B0 1012 aaPredicted RBP20.51■□□□□ 0.87
VRK3-225ENST00000601912 CNKSR2Q8WXI2 1034 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
VRK3-225ENST00000601912 TMEM63CQ9P1W3 806 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 CCPG1Q9ULG6 757 aa20.51■□□□□ 0.87
VRK3-225ENST00000601912 IRF6O14896 467 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 LIG1P18858 919 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 PTPREP23469 700 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 CMA1P23946 247 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 PTGDRQ13258 359 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 CATSPERGQ6ZRH7 1159 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 FSIP1Q8NA03 581 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
VRK3-225ENST00000601912 SRPRBQ9Y5M8 271 aaKnown RBP20.5■□□□□ 0.87
VRK3-225ENST00000601912 WNT7AO00755 349 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 FOSP01100 380 aaPredicted RBP20.49■□□□□ 0.87
VRK3-225ENST00000601912 ATP2C1P98194 919 aaPredicted RBP20.49■□□□□ 0.87
VRK3-225ENST00000601912 ORC2Q13416 577 aaPredicted RBP20.49■□□□□ 0.87
VRK3-225ENST00000601912 LETM2Q2VYF4 491 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 CCDC183Q5T5S1 534 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 FERMT2Q96AC1 680 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 OPTNQ96CV9 577 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 SLC10A4Q96EP9 437 aa20.49■□□□□ 0.87
VRK3-225ENST00000601912 PIK3CDO00329 1044 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 VWA5AO00534 786 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 MEIS2O14770 477 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 DSG3P32926 999 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 CPXCR1Q8N123 301 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 PROCA1Q8NCQ7 364 aaPredicted RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 DDX19AQ9NUU7 478 aaKnown RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 DACT1Q9NYF0 836 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 FBXO2Q9UK22 296 aaPredicted RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 KCNH4Q9UQ05 1017 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 ZNF536O15090 1300 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 MYPNQ86TC9 1320 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 LAD1O00515 517 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 CCNT1O60563 726 aaKnown RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 FAM160A1Q05DH4 1040 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 C2orf69Q8N8R5 385 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 ATG4CQ96DT6 458 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
VRK3-225ENST00000601912 NAP1L4Q99733 375 aaKnown RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
VRK3-225ENST00000601912 GCOM1H8Y6P7 765 aaPredicted RBP20.47■□□□□ 0.87
VRK3-225ENST00000601912 LETM1O95202 739 aaPredicted RBP20.47■□□□□ 0.87
VRK3-225ENST00000601912 POLR2MP0CAP2 368 aa20.47■□□□□ 0.87
VRK3-225ENST00000601912 FMR1Q06787 632 aaKnown RBP eCLIP20.47■□□□□ 0.87
VRK3-225ENST00000601912 ARL6IP4Q66PJ3 421 aaKnown RBP20.47■□□□□ 0.87
VRK3-225ENST00000601912 GADL1Q6ZQY3 521 aa20.47■□□□□ 0.87
VRK3-225ENST00000601912 CLIC6Q96NY7 704 aa20.47■□□□□ 0.87
VRK3-225ENST00000601912 RAVER2Q9HCJ3 691 aaKnown RBP20.47■□□□□ 0.87
VRK3-225ENST00000601912 OPLAHO14841 1288 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 NR1I2O75469 434 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 CELF2O95319 508 aaKnown RBP20.46■□□□□ 0.87
VRK3-225ENST00000601912 TAL1P17542 331 aaPredicted RBP20.46■□□□□ 0.87
VRK3-225ENST00000601912 OAZ1P54368 228 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 CHADLQ6NUI6 762 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 ANO3Q9BYT9 981 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 GOLPH3LQ9H4A5 285 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
VRK3-225ENST00000601912 A0A1B0GVL5 298 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 CFBP00751 764 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms