RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CCDC174Q6PII3 467 aa20.73■□□□□ 0.91
SHKBP1-203ENST00000594298 RILPL2Q969X0 211 aa20.73■□□□□ 0.91
SHKBP1-203ENST00000594298 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
SHKBP1-203ENST00000594298 GNEQ9Y223 722 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-203ENST00000594298 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 FOSL2P15408 326 aa20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 CCDC129Q6ZRS4 1044 aa20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 VTI1AQ96AJ9 217 aa20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 HELLSQ9NRZ9 838 aa20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
SHKBP1-203ENST00000594298 TLR3O15455 904 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 NMT2O60551 498 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 CABYRO75952 493 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 CD4P01730 458 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 FGRP09769 529 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 ALAS1P13196 640 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 DNAJB2P25686 324 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 CTDSPL2Q05D32 466 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 RASIP1Q5U651 963 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 KCTD1Q719H9 257 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 C16orf59Q7L2K0 433 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 TMEM199Q8N511 208 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 SLC43A3Q8NBI5 491 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 CYP39A1Q9NYL5 469 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 ASTN1O14525 1302 aa20.71■□□□□ 0.91
SHKBP1-203ENST00000594298 ORC4O43929 436 aa20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 ALX1Q15699 326 aa20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 TMEM240Q5SV17 173 aa20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 CENPQQ7L2Z9 268 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 TLK2Q86UE8 772 aa20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 SEZ6LQ9BYH1 1024 aa20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 Q9Y3F1 56 aa20.7■□□□□ 0.9
SHKBP1-203ENST00000594298 CDH23Q9H251 3354 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 HIP1O00291 1037 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 CSF2RAP15509 400 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 BEX3Q00994 111 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 MUM1L1Q5H9M0 696 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 VPS53Q5VIR6 699 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 IQSEC1Q6DN90 963 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 NOL8Q76FK4 1167 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 MORC4Q8TE76 937 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 DCAF4Q8WV16 495 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 TIFAQ96CG3 184 aa20.69■□□□□ 0.9
SHKBP1-203ENST00000594298 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 ICAM1P05362 532 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 SMPD1P17405 629 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 PDE4AP27815 886 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 SNAP25P60880 206 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 GRIN2CQ14957 1233 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 FSCN1Q16658 493 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 TAPT1Q6NXT6 567 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 PSRC1Q6PGN9 363 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 CXCL17Q6UXB2 119 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 BTNL9Q6UXG8 535 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 RASGRP2Q7LDG7 609 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 CHMP4CQ96CF2 233 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 AP5M1Q9H0R1 490 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 RANBP17Q9H2T7 1088 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 ZNF576Q9H609 170 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 CCPG1Q9ULG6 757 aa20.68■□□□□ 0.9
SHKBP1-203ENST00000594298 ZEB2O60315 1214 aa20.67■□□□□ 0.9
SHKBP1-203ENST00000594298 MCMDC2Q4G0Z9 681 aa20.67■□□□□ 0.9
SHKBP1-203ENST00000594298 VTA1Q9NP79 307 aa20.67■□□□□ 0.9
SHKBP1-203ENST00000594298 EYSQ5T1H1 3165 aa20.67■□□□□ 0.9
SHKBP1-203ENST00000594298 LOC102724159A0A0B4J2E5 919 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 DYNC1LI2O43237 492 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 SDSP20132 328 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 MFAP1P55081 439 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 ITGA7Q13683 1181 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 PWP2Q15269 919 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 ZNF365Q70YC5 407 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 FBXO16Q8IX29 292 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 CCDC136Q96JN2 1154 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 PPP1R12CQ9BZL4 782 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 PDGFCQ9NRA1 345 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 TCP11L1Q9NUJ3 509 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 CUL9Q8IWT3 2517 aa20.66■□□□□ 0.9
SHKBP1-203ENST00000594298 MCM3APO60318 1980 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 GRIN2DO15399 1336 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 TTC22Q5TAA0 569 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 NSMFQ6X4W1 530 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 HERVK_113Q902F9 699 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 PBX4Q9BYU1 374 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 IL23AQ9NPF7 189 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 DIAPH3Q9NSV4 1193 aa20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-203ENST00000594298 LRRC37A2A6NM11 1700 aa20.64■□□□□ 0.9
SHKBP1-203ENST00000594298 ZMYM6O95789 1325 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 FGAP02671 866 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 ACRP10323 421 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 TOP1P11387 765 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 CYP2C18P33260 490 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 NMIQ13287 307 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 TTBK2Q6IQ55 1244 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 EEPD1Q7L9B9 569 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 TMEM47Q9BQJ4 181 aa20.64■□□□□ 0.89
SHKBP1-203ENST00000594298 HIPK3Q9H422 1215 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms