RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 RANBP17Q9H2T7 1088 aaKnown RBP15.91■□□□□ 0.14
CAPNS1-213ENST00000592354 CYP39A1Q9NYL5 469 aa15.91■□□□□ 0.14
CAPNS1-213ENST00000592354 ICAM1P05362 532 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 PDHBP11177 359 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 RAG1P15918 1043 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 CST5P28325 142 aaPredicted RBP15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 EPHB4P54760 987 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 BEX3Q00994 111 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 AKNAD1Q5T1N1 836 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 CWC27Q6UX04 472 aaKnown RBP15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 MFSD6Q6ZSS7 791 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 NOL8Q76FK4 1167 aaKnown RBP15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 EEPD1Q7L9B9 569 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 FBXO16Q8IX29 292 aaPredicted RBP15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 GLT1D1Q96MS3 346 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 ZKSCAN3Q9BRR0 538 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 SPC25Q9HBM1 224 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 DIAPH3Q9NSV4 1193 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 TMEM39AQ9NV64 488 aa15.9■□□□□ 0.14
CAPNS1-213ENST00000592354 NFIBO00712 420 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 KIAA0355O15063 1070 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 CTAGE5O15320 804 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 GJA9P57773 515 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 TNFAIP2Q03169 654 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 GNASQ5JWF2 1037 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 ANKRD33Q7Z3H0 272 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 TLK2Q86UE8 772 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 PCSK9Q8NBP7 692 aaKnown RBP15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 SLC17A8Q8NDX2 589 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 VTI1AQ96AJ9 217 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 TCP11L1Q9NUJ3 509 aa15.89■□□□□ 0.13
CAPNS1-213ENST00000592354 ASB14A6NK59 587 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 DCDC2CA8MYV0 355 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 BTNL9Q6UXG8 535 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 SLC30A10Q6XR72 485 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 TICAM2Q86XR7 235 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 OSBPL3Q9H4L5 887 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 PDGFCQ9NRA1 345 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 STXBP5LQ9Y2K9 1186 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 LAMA2P24043 3122 aaKnown RBP15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 MYH6P13533 1939 aa15.88■□□□□ 0.13
CAPNS1-213ENST00000592354 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 GOLGA8HP0CJ92 632 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 FPGSQ05932 587 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 ZNF543Q08ER8 600 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 TMEM63BQ5T3F8 832 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 ZNF697Q5TEC3 545 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 CXCL17Q6UXB2 119 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 GUCD1Q96NT3 240 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 RNF41Q9H4P4 317 aaPredicted RBP15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 ELP1O95163 1332 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 MROH7Q68CQ1 1323 aa15.87■□□□□ 0.13
CAPNS1-213ENST00000592354 ZNF213O14771 459 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 PCP11498 1178 aaKnown RBP15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 SMPD1P17405 629 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 CALML3P27482 149 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 ALDH5A1P51649 535 aaPredicted RBP15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 ESR2Q92731 530 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 TOX2Q96NM4 488 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 CPVLQ9H3G5 476 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 TBX21Q9UL17 535 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 GNEQ9Y223 722 aaKnown RBP15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 CDH23Q9H251 3354 aa15.86■□□□□ 0.13
CAPNS1-213ENST00000592354 B4E1Z4 1266 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 ARVCFO00192 962 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 KDM4AO75164 1064 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 SNHG28P0DPA3 235 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 CDK7P50613 346 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 FSCN1Q16658 493 aaKnown RBP15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 FAM109BQ6ICB4 259 aaPredicted RBP15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 TAPT1Q6NXT6 567 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 FAM126BQ8IXS8 530 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 CLEC4DQ8WXI8 215 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 PPP1R12CQ9BZL4 782 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 AP5M1Q9H0R1 490 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 IL25Q9H293 177 aa15.85■□□□□ 0.13
CAPNS1-213ENST00000592354 DYNC1LI2O43237 492 aaPredicted RBP15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 TIMP1P01033 207 aa15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 USH1GQ495M9 461 aa15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 KIAA1211Q6ZU35 1233 aa15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 TTC14Q96N46 770 aa15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 VTA1Q9NP79 307 aa15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 ADD3Q9UEY8 706 aaKnown RBP15.84■□□□□ 0.13
CAPNS1-213ENST00000592354 GBF1Q92538 1859 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 HIP1O00291 1037 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 PSMC6P62333 389 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 NKX3-2P78367 333 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 SMAD3P84022 425 aaKnown RBP15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 RNF207Q6ZRF8 634 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 IQCA1Q86XH1 822 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 PNMA1Q8ND90 353 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 MORC4Q8TE76 937 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 UBA5Q9GZZ9 404 aa15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
CAPNS1-213ENST00000592354 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms