RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	KLRF2	D3W0D1	207 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	SEPT4	O43236	478 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	CYTH3	O43739	400 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	PPP1R11	O60927	126 aa	Predicted RBP	20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	CAPN2	P17655	700 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	MCM5	P33992	734 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	EXOSC10	Q01780	885 aa	Known RBP	20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	ANO1	Q5XXA6	986 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	LRRC37A2	A6NM11	1700 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	SYNGAP1	Q96PV0	1343 aa		20.21	■□□□□ 0.83
MBD1-221	ENST00000589867	POTEB2	H3BUK9	544 aa		20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	HSPA4	P34932	840 aa		20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	QRICH1	Q2TAL8	776 aa		20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	MSL3	Q8N5Y2	521 aa	Known RBP	20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	ANKLE1	Q8NAG6	615 aa		20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	MYL10	Q9BUA6	226 aa		20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	NRBP1	Q9UHY1	535 aa		20.2	■□□□□ 0.82
MBD1-221	ENST00000589867	ERICH2	A1L162	156 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	ADCY6	O43306	1168 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	COL6A1	P12109	1028 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	CNGA1	P29973	690 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	BAAT	Q14032	418 aa	Predicted RBP	20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	SART3	Q15020	963 aa	Known RBP	20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	SLC30A10	Q6XR72	485 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	ZNF654	Q8IZM8	581 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	TBC1D5	Q92609	795 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	TMEM87B	Q96K49	555 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	TCEANC2	Q96MN5	208 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	NEK1	Q96PY6	1258 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	RIOX1	Q9H6W3	641 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	VAT1L	Q9HCJ6	419 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	PFAS	O15067	1338 aa		20.19	■□□□□ 0.82
MBD1-221	ENST00000589867	OPLAH	O14841	1288 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	LIFR	P42702	1097 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	USH1G	Q495M9	461 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	RNF20	Q5VTR2	975 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	NSMF	Q6X4W1	530 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	ARMCX2	Q7L311	632 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	CCDC144CP	Q8IYA2	1237 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	LENG1	Q96BZ8	264 aa	Predicted RBP	20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	SNX14	Q9Y5W7	946 aa		20.18	■□□□□ 0.82
MBD1-221	ENST00000589867	MSC	O60682	206 aa		20.17	■□□□□ 0.82
MBD1-221	ENST00000589867	MORC4	Q8TE76	937 aa		20.17	■□□□□ 0.82
MBD1-221	ENST00000589867	DDAH1	O94760	285 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	CPA1	P15085	419 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	RXRA	P19793	462 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	RPS6	P62753	249 aa	Known RBP	20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	DHX32	Q7L7V1	743 aa	Known RBP	20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	NECAB2	Q7Z6G3	386 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	CATIP	Q7Z7H3	387 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	SGMS1	Q86VZ5	419 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	MAP3K14	Q99558	947 aa		20.16	■□□□□ 0.82
MBD1-221	ENST00000589867	ACVR2B	Q13705	512 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	RAB11FIP4	Q86YS3	637 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	NUP133	Q8WUM0	1156 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	PIGS	Q96S52	555 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	USP26	Q9BXU7	913 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	COL20A1	Q9P218	1284 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	PNMA2	Q9UL42	364 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	BRPF3	Q9ULD4	1205 aa		20.15	■□□□□ 0.82
MBD1-221	ENST00000589867	ABCB11	O95342	1321 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	ZBTB5	O15062	677 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	PLEKHA8P1	O95397	391 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	IRX5	P78411	483 aa	Predicted RBP	20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	TMEM63B	Q5T3F8	832 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	GJC2	Q5T442	439 aa	Predicted RBP	20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	RNF207	Q6ZRF8	634 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	FBXO11	Q86XK2	927 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	RGS22	Q8NE09	1264 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	C11orf49	Q9H6J7	331 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	CNPY2	Q9Y2B0	182 aa		20.14	■□□□□ 0.81
MBD1-221	ENST00000589867	PTPDC1	A2A3K4	754 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	DHX16	O60231	1041 aa	Known RBP	20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	REC8	O95072	547 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	PTGS1	P23219	599 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	ALDH5A1	P51649	535 aa	Predicted RBP	20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	LRRC41	Q15345	812 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	TAPT1	Q6NXT6	567 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	TMTC2	Q8N394	836 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	SRBD1	Q8N5C6	995 aa	Known RBP	20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	ABHD16B	Q9H3Z7	469 aa		20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	ZHX1	Q9UKY1	873 aa	Predicted RBP	20.13	■□□□□ 0.81
MBD1-221	ENST00000589867	RANBP2	P49792	3224 aa	Known RBP	20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	DNM1L	O00429	736 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	EPB41L2	O43491	1005 aa	Known RBP	20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	ADAMTS4	O75173	837 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	AKR1A1	P14550	325 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	EDNRB	P24530	442 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	CALML3	P27482	149 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	GHRHR	Q02643	423 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	KRT32	Q14532	448 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	CCDC144B	Q3MJ40	725 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	PRPF38B	Q5VTL8	546 aa	Known RBP	20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	APOA5	Q6Q788	366 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	CMTR1	Q8N1G2	835 aa	Known RBP	20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	SYTL5	Q8TDW5	730 aa	Predicted RBP	20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	SPZ1	Q9BXG8	430 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	AMN	Q9BXJ7	453 aa		20.12	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms