RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 NSMFQ6X4W1 530 aa19.11■□□□□ 0.65
DNMT1-221ENST00000589538 STAG2Q8N3U4 1231 aa19.11■□□□□ 0.65
DNMT1-221ENST00000589538 FAM133AQ8N9E0 248 aa19.11■□□□□ 0.65
DNMT1-221ENST00000589538 CTCFLQ8NI51 663 aaPredicted RBP19.11■□□□□ 0.65
DNMT1-221ENST00000589538 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
DNMT1-221ENST00000589538 SENP2Q9HC62 589 aa19.11■□□□□ 0.65
DNMT1-221ENST00000589538 MYH6P13533 1939 aa19.11■□□□□ 0.65
DNMT1-221ENST00000589538 BRCA2P51587 3418 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 ASB14A6NK59 587 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
DNMT1-221ENST00000589538 SYNE3Q6ZMZ3 975 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 UBE2Q1Q7Z7E8 422 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 FBXO11Q86XK2 927 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 RASEFQ8IZ41 740 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 RGS22Q8NE09 1264 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 TRPV1Q8NER1 839 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 NUP133Q8WUM0 1156 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 LZTS2Q9BRK4 669 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 CPVLQ9H3G5 476 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 VAT1LQ9HCJ6 419 aa19.1■□□□□ 0.65
DNMT1-221ENST00000589538 SMCHD1A6NHR9 2005 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 QRICH1Q2TAL8 776 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 MCF2L2Q86YR7 1114 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 MTMR8Q96EF0 704 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 HTATIP2Q9BUP3 242 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 ABHD16BQ9H3Z7 469 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 RIOX1Q9H6W3 641 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 ADD3Q9UEY8 706 aaKnown RBP19.09■□□□□ 0.65
DNMT1-221ENST00000589538 MRPL11Q9Y3B7 192 aaKnown RBP19.09■□□□□ 0.65
DNMT1-221ENST00000589538 SLC12A7Q9Y666 1083 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 FRMPD3Q5JV73 1810 aa19.09■□□□□ 0.65
DNMT1-221ENST00000589538 PTPDC1A2A3K4 754 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 NFIBO00712 420 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 ZBTB5O15062 677 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 PSMA5P28066 241 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 SMARCA1P28370 1054 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 EXOSC10Q01780 885 aaKnown RBP19.08■□□□□ 0.64
DNMT1-221ENST00000589538 CNTN2Q02246 1040 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 BAATQ14032 418 aaPredicted RBP19.08■□□□□ 0.64
DNMT1-221ENST00000589538 ADCK5Q3MIX3 580 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 USH1GQ495M9 461 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 RNF207Q6ZRF8 634 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 NECAB2Q7Z6G3 386 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 CLEC4DQ8WXI8 215 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 MPHOSPH6Q99547 160 aaKnown RBP19.08■□□□□ 0.64
DNMT1-221ENST00000589538 AMNQ9BXJ7 453 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 SNX14Q9Y5W7 946 aa19.08■□□□□ 0.64
DNMT1-221ENST00000589538 TNRC18O15417 2968 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-221ENST00000589538 SNAI1O95863 264 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-221ENST00000589538 ZNF865P0CJ78 1059 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-221ENST00000589538 AKR1A1P14550 325 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 FGD1P98174 961 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 PRAMEF19Q5SWL8 479 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 BLOC1S2Q6QNY1 142 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 ARMCX2Q7L311 632 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 ARRDC4Q8NCT1 418 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 FGD4Q96M96 766 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 JAKMIP1Q96N16 626 aaKnown RBP19.07■□□□□ 0.64
DNMT1-221ENST00000589538 SPZ1Q9BXG8 430 aa19.07■□□□□ 0.64
DNMT1-221ENST00000589538 GPHNQ9NQX3 736 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-221ENST00000589538 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-221ENST00000589538 SOWAHBA6NEL2 793 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 B4DLN1 442 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 RARBP10826 455 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 MRPL12P52815 198 aaKnown RBP19.06■□□□□ 0.64
DNMT1-221ENST00000589538 ACVR2BQ13705 512 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 CCDC144CPQ8IYA2 1237 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 SAMD3Q8N6K7 520 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 USP26Q9BXU7 913 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 LRRC2Q9BYS8 371 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 FAM184BQ9ULE4 1060 aa19.06■□□□□ 0.64
DNMT1-221ENST00000589538 PNMA6FA0A0J9YX94 578 aa19.05■□□□□ 0.64
DNMT1-221ENST00000589538 TAL1P17542 331 aaPredicted RBP19.05■□□□□ 0.64
DNMT1-221ENST00000589538 CALML3P27482 149 aa19.05■□□□□ 0.64
DNMT1-221ENST00000589538 RCAN1P53805 252 aa19.05■□□□□ 0.64
DNMT1-221ENST00000589538 DNERQ8NFT8 737 aa19.05■□□□□ 0.64
DNMT1-221ENST00000589538 PAWRQ96IZ0 340 aaKnown RBP19.05■□□□□ 0.64
DNMT1-221ENST00000589538 MYL10Q9BUA6 226 aa19.05■□□□□ 0.64
DNMT1-221ENST00000589538 MAP3K20Q9NYL2 800 aaKnown RBP19.05■□□□□ 0.64
DNMT1-221ENST00000589538 ZHX1Q9UKY1 873 aaPredicted RBP19.05■□□□□ 0.64
DNMT1-221ENST00000589538 MCM3APO60318 1980 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 ALDH5A1P51649 535 aaPredicted RBP19.04■□□□□ 0.64
DNMT1-221ENST00000589538 RPS6P62753 249 aaKnown RBP19.04■□□□□ 0.64
DNMT1-221ENST00000589538 COL9A3Q14050 684 aaPredicted RBP19.04■□□□□ 0.64
DNMT1-221ENST00000589538 APOA5Q6Q788 366 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 HOMER1Q86YM7 354 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 FANCBQ8NB91 859 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 MORC4Q8TE76 937 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 RRP36Q96EU6 259 aaKnown RBP19.04■□□□□ 0.64
DNMT1-221ENST00000589538 C11orf49Q9H6J7 331 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
DNMT1-221ENST00000589538 PCDHA1Q9Y5I3 950 aa19.04■□□□□ 0.64
DNMT1-221ENST00000589538 PDE4DIPQ5VU43 2346 aa19.03■□□□□ 0.64
DNMT1-221ENST00000589538 DNM1LO00429 736 aa19.03■□□□□ 0.64
DNMT1-221ENST00000589538 ZBTB43O43298 467 aa19.03■□□□□ 0.64
DNMT1-221ENST00000589538 CYTH3O43739 400 aa19.03■□□□□ 0.64
DNMT1-221ENST00000589538 PPP2R5BQ15173 497 aa19.03■□□□□ 0.64
DNMT1-221ENST00000589538 SLC30A10Q6XR72 485 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms