RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 RAD9AQ99638 391 aa9.75□□□□□ -0.85
PPP4R1-211ENST00000578875 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
PPP4R1-211ENST00000578875 FAM50BQ9Y247 325 aa9.75□□□□□ -0.85
PPP4R1-211ENST00000578875 TNKSO95271 1327 aa9.75□□□□□ -0.85
PPP4R1-211ENST00000578875 ATRXP46100 2492 aa9.75□□□□□ -0.85
PPP4R1-211ENST00000578875 PKD1L2Q7Z442 2459 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 CHD6Q8TD26 2715 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 GJB5O95377 273 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 PLCG2P16885 1265 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 KCNJ6P48051 423 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 CNTN2Q02246 1040 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 ATF7IPQ6VMQ6 1270 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 RPAINQ86UA6 219 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 TLK2Q86UE8 772 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 ACACBO00763 2458 aa9.74□□□□□ -0.85
PPP4R1-211ENST00000578875 EP300Q09472 2414 aaPredicted RBP9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 LINC01565O15544 149 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 EPC2Q52LR7 807 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 MIGA1Q8NAN2 632 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 RETREG2Q8NC44 543 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 NKD2Q969F2 451 aaPredicted RBP9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 MCM3APO60318 1980 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 ZFHX4Q86UP3 3567 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 WDR87Q6ZQQ6 2873 aa9.73□□□□□ -0.85
PPP4R1-211ENST00000578875 CACNA1FO60840 1977 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 BAIAP3O94812 1187 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 SUPT20HL2P0C7V6 817 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 RFC2P35250 354 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 USP5P45974 858 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 SIGLEC14Q08ET2 396 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 HYAL1Q12794 435 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 GPM6BQ13491 265 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 MVPQ14764 893 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.72□□□□□ -0.858e-10■■■■■ 38.8
PPP4R1-211ENST00000578875 EEPD1Q7L9B9 569 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 AP5M1Q9H0R1 490 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 EHD4Q9H223 541 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 IGFLR1Q9H665 355 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 TMX2Q9Y320 296 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 MYO15AQ9UKN7 3530 aa9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 COL11A1P12107 1806 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-211ENST00000578875 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.85
PPP4R1-211ENST00000578875 LOC730098B7Z3J9 87 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 TBX10O75333 385 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 CYP2E1P05181 493 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 CYP7A1P22680 504 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 GABPAQ06546 454 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 NBPF20Q3BBV1 942 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 FAM47CQ5HY64 1035 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 SNRNP48Q6IEG0 339 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 TTC6Q86TZ1 520 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 TMEM105Q8N8V8 129 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 CRBNQ96SW2 442 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 POP1Q99575 1024 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 NSUN3Q9H649 340 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 VCPKMTQ9H867 229 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 PIH1D3Q9NQM4 214 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 PPP1R9AQ9ULJ8 1098 aa9.71□□□□□ -0.86
PPP4R1-211ENST00000578875 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 H3BNC9 293 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 NBNO60934 754 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 CSPG5O95196 566 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 MYL3P08590 195 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 CYP2D6P10635 497 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 AKR1B1P15121 316 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 PTPROQ16827 1216 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 ST3GAL2Q16842 350 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 FAM83BQ5T0W9 1011 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 TAPT1Q6NXT6 567 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 DYNLL2Q96FJ2 89 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 NUP88Q99567 741 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 COPRSQ9NQ92 184 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 IL16Q14005 1332 aa9.7□□□□□ -0.86
PPP4R1-211ENST00000578875 E9PSI1 815 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 WDR46O15213 610 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 RAD21O60216 631 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 ZEB2O60315 1214 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 MAP1BP46821 2468 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 PURAQ00577 322 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 SMAD4Q13485 552 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 TIGD5Q53EQ6 642 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 ANKRD35Q8N283 1001 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 RPGRIP1Q96KN7 1286 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 RIPOR3Q96MK2 946 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 PURBQ96QR8 312 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 CTAGE1Q96RT6 745 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 SEZ6LQ9BYH1 1024 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 RAVER2Q9HCJ3 691 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms