RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 PNMA1Q8ND90 353 aa13.97□□□□□ -0.17
LITAF-219ENST00000576334 TTC14Q96N46 770 aa13.97□□□□□ -0.17
LITAF-219ENST00000576334 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
LITAF-219ENST00000576334 PDGFCQ9NRA1 345 aa13.97□□□□□ -0.17
LITAF-219ENST00000576334 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
LITAF-219ENST00000576334 PHF24Q9UPV7 400 aa13.97□□□□□ -0.17
LITAF-219ENST00000576334 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
LITAF-219ENST00000576334 TNKSO95271 1327 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 A0A1W2PQ45 241 aaPredicted RBP13.96□□□□□ -0.17
LITAF-219ENST00000576334 A0A1W2PQY0 241 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 KCNA10Q16322 511 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 TKFCQ3LXA3 575 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 CCSAPQ6IQ19 270 aaPredicted RBP13.96□□□□□ -0.17
LITAF-219ENST00000576334 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 FBXO16Q8IX29 292 aaPredicted RBP13.96□□□□□ -0.17
LITAF-219ENST00000576334 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 UBE2OQ9C0C9 1292 aaKnown RBP13.96□□□□□ -0.17
LITAF-219ENST00000576334 ABHD16BQ9H3Z7 469 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
LITAF-219ENST00000576334 PRDM5Q9NQX1 630 aaPredicted RBP13.96□□□□□ -0.17
LITAF-219ENST00000576334 TRIM43BA6NCK2 446 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 CTAGE5O15320 804 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 CYP21A2P08686 494 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 ITGB8P26012 769 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 BMP8BP34820 402 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 ACLYP53396 1101 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 BEX3Q00994 111 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 TLE2Q04725 743 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 COL9A3Q14050 684 aaPredicted RBP13.95□□□□□ -0.18
LITAF-219ENST00000576334 SNX17Q15036 470 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 USH1GQ495M9 461 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 STOX1Q6ZVD7 989 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 RNF180Q86T96 592 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 IQCA1Q86XH1 822 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 KLHDC9Q8NEP7 349 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 TRIM43Q96BQ3 446 aaPredicted RBP13.95□□□□□ -0.18
LITAF-219ENST00000576334 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 CTNNA3Q9UI47 895 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 COL6A3P12111 3177 aa13.95□□□□□ -0.18
LITAF-219ENST00000576334 PTPDC1A2A3K4 754 aa13.94□□□□□ -0.18
LITAF-219ENST00000576334 DUSP11O75319 330 aaKnown RBP13.94□□□□□ -0.18
LITAF-219ENST00000576334 C6orf222P0C671 652 aaPredicted RBP13.94□□□□□ -0.18
LITAF-219ENST00000576334 CALML3P27482 149 aa13.94□□□□□ -0.18
LITAF-219ENST00000576334 STAG2Q8N3U4 1231 aa13.94□□□□□ -0.18
LITAF-219ENST00000576334 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
LITAF-219ENST00000576334 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
LITAF-219ENST00000576334 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
LITAF-219ENST00000576334 SGSM2O43147 1006 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
LITAF-219ENST00000576334 SMPD1P17405 629 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 SEC23AQ15436 765 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
LITAF-219ENST00000576334 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 TDHQ8IZJ6 230 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 BADQ92934 168 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 KRT23Q9C075 422 aa13.93□□□□□ -0.18
LITAF-219ENST00000576334 RAD50Q92878 1312 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 MYH6P13533 1939 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 A0A1W2PPC1 479 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 ASB14A6NK59 587 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 ASGR1P07306 291 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 ALDH5A1P51649 535 aaPredicted RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 GJA9P57773 515 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 TNFAIP2Q03169 654 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 UPF3AQ9H1J1 476 aaKnown RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 CNNM2Q9H8M5 875 aa13.92□□□□□ -0.18
LITAF-219ENST00000576334 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 GNEQ9Y223 722 aaKnown RBP13.92□□□□□ -0.18
LITAF-219ENST00000576334 E7EWF7 191 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 DYNC1LI2O43237 492 aaPredicted RBP13.91□□□□□ -0.18
LITAF-219ENST00000576334 QRICH1Q2TAL8 776 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 IFIT1BQ5T764 474 aaKnown RBP13.91□□□□□ -0.18
LITAF-219ENST00000576334 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 RNF207Q6ZRF8 634 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 Q7L0L9 218 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 LBHD1Q9BQE6 289 aaPredicted RBP13.91□□□□□ -0.18
LITAF-219ENST00000576334 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 STARD7Q9NQZ5 370 aa13.91□□□□□ -0.18
LITAF-219ENST00000576334 BAZ2BQ9UIF8 2168 aaKnown RBP13.9□□□□□ -0.18
LITAF-219ENST00000576334 DHX16O60231 1041 aaKnown RBP13.9□□□□□ -0.18
LITAF-219ENST00000576334 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
LITAF-219ENST00000576334 EPHB4P54760 987 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 ANTXR2P58335 489 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 FAAP100Q0VG06 881 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 TLK2Q86UE8 772 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 MORC4Q8TE76 937 aa13.9□□□□□ -0.18
LITAF-219ENST00000576334 PPP1R13LQ8WUF5 828 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms