RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 FAM9BQ8IZU0 186 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 VWCEQ96DN2 955 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 DYNLL2Q96FJ2 89 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 FGD4Q96M96 766 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 ACAD9Q9H845 621 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 RAVER2Q9HCJ3 691 aaKnown RBP7.08□□□□□ -1.28
SMG6-219ENST00000575663 HOMER2Q9NSB8 354 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 TLR7Q9NYK1 1049 aaKnown RBP7.08□□□□□ -1.28
SMG6-219ENST00000575663 MTUS1Q9ULD2 1270 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 RIPK3Q9Y572 518 aa7.08□□□□□ -1.28
SMG6-219ENST00000575663 COL4A4P53420 1690 aaPredicted RBP7.08□□□□□ -1.28
SMG6-219ENST00000575663 PRRC2BQ5JSZ5 2229 aaKnown RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 LCHNA4D1U4 455 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 H3BQ06 376 aaPredicted RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 ANP32CO43423 234 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 GFRA3O60609 400 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 EFCAB14O75071 495 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SURF6O75683 361 aaKnown RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 PARNO95453 639 aaKnown RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 IQCF3P0C7M6 154 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 PDE6AP16499 860 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SMPD1P17405 629 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 CDK8P49336 464 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 ERVK-21P61565 698 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 WDR5P61964 334 aaKnown RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 EVX2Q03828 476 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 ZP2Q05996 745 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SLC9C2Q5TAH2 1124 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 IQSEC1Q6DN90 963 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 EP400NLQ6ZTU2 488 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 C16orf86Q6ZW13 317 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SPRED2Q7Z698 418 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 ADHFE1Q8IWW8 467 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SUGP1Q8IWZ8 645 aaKnown RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 FBXO16Q8IX29 292 aaPredicted RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 LCORLQ8N3X6 602 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 FAM133AQ8N9E0 248 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 FBXO22Q8NEZ5 403 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 CAGE1Q8TC20 777 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 NEK9Q8TD19 979 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMG6-219ENST00000575663 NUP88Q99567 741 aaPredicted RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 RAD9AQ99638 391 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 MTG1Q9BT17 334 aaPredicted RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 CCDC8Q9H0W5 538 aaPredicted RBP7.07□□□□□ -1.28
SMG6-219ENST00000575663 IRF2BPLQ9H1B7 796 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 ANTXR1Q9H6X2 564 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 SLC38A10Q9HBR0 1119 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 VTA1Q9NP79 307 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 ATP8A2Q9NTI2 1148 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 FEM1BQ9UK73 627 aa7.07□□□□□ -1.28
SMG6-219ENST00000575663 ZNF532Q9HCE3 1301 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 LINC01553A4QN01 128 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 USP17L21D6R901 530 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 F5H6K3 240 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 GJB5O95377 273 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 NDUFB10O96000 172 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 MYL3P08590 195 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 FDX1P10109 184 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 PURAQ00577 322 aaKnown RBP7.06□□□□□ -1.28
SMG6-219ENST00000575663 CNTN2Q02246 1040 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 PTPN11Q06124 597 aaPredicted RBP7.06□□□□□ -1.28
SMG6-219ENST00000575663 KLRC3Q07444 240 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 CNKSR3Q6P9H4 555 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 EEPD1Q7L9B9 569 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 PRSS33Q8NF86 280 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 AFAP1L1Q8TED9 768 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 ARHGAP45Q92619 1136 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 PABPC5Q96DU9 382 aaKnown RBP7.06□□□□□ -1.28
SMG6-219ENST00000575663 PHOX2BQ99453 314 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 A1CFQ9NQ94 594 aaKnown RBP7.06□□□□□ -1.28
SMG6-219ENST00000575663 ISY1Q9ULR0 285 aaKnown RBP7.06□□□□□ -1.28
SMG6-219ENST00000575663 USP34Q70CQ2 3546 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 WDFY4Q6ZS81 3184 aa7.06□□□□□ -1.28
SMG6-219ENST00000575663 TRANK1O15050 2925 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 SMCHD1A6NHR9 2005 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 C19orf67A6NJJ6 358 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 IPO8O15397 1037 aaKnown RBP7.05□□□□□ -1.28
SMG6-219ENST00000575663 STAT2P52630 851 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 DEFB103AP81534 67 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 SLFN5Q08AF3 891 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 IKQ13123 557 aaPredicted RBP7.05□□□□□ -1.28
SMG6-219ENST00000575663 POLA2Q14181 598 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 TKFCQ3LXA3 575 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 DUSP28Q4G0W2 176 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 HERC4Q5GLZ8 1057 aaPredicted RBP7.05□□□□□ -1.28
SMG6-219ENST00000575663 C12orf60Q5U649 245 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 KIAA1211Q6ZU35 1233 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 OR6J1Q8NGC5 347 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 MRPL38Q96DV4 380 aaKnown RBP7.05□□□□□ -1.28
SMG6-219ENST00000575663 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 ARMT1Q9H993 441 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 NYAP2Q9P242 653 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 ARPP21Q9UBL0 812 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms