RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 ARVCFO00192 962 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 SPTLC1O15269 473 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 CTAGE5O15320 804 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 ADCY6O43306 1168 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 MBD4O95243 580 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 ASGR1P07306 291 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 ATP5JP18859 108 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 GJA9P57773 515 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 PPIGQ13427 754 aaKnown RBP eCLIP9.74□□□□□ -0.852e-11■■□□□ 13
NPLOC4-211ENST00000573212 ACVR2BQ13705 512 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 ADGRE1Q14246 886 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 UBE3CQ15386 1083 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 FAM83BQ5T0W9 1011 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 CTR9Q6PD62 1173 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 SLC43A3Q8NBI5 491 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 KIF1BPQ96EK5 621 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 FGD4Q96M96 766 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 DNAJC2Q99543 621 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 KATNBL1Q9H079 304 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 UPF3AQ9H1J1 476 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 PAG1Q9NWQ8 432 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 NYAP2Q9P242 653 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 MUC3AQ02505 3323 aa9.74□□□□□ -0.85
NPLOC4-211ENST00000573212 F5H6K3 240 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 CD4P01730 458 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 CSF2RAP15509 400 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 CD46P15529 392 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 KLRC3Q07444 240 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 ZNF365Q70YC5 407 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 SIRT2Q8IXJ6 389 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 RPAP2Q8IXW5 612 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 FTSJ3Q8IY81 847 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 PCSK9Q8NBP7 692 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 HERVK_113Q902F9 699 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 MKL1Q969V6 931 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 GLT1D1Q96MS3 346 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 ASB2Q96Q27 587 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 SLF1Q9BQI6 1058 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 TEX13BQ9BXU2 312 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 ABHD16BQ9H3Z7 469 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 MROH7Q68CQ1 1323 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 SMCHD1A6NHR9 2005 aa9.73□□□□□ -0.85
NPLOC4-211ENST00000573212 PRUNE2Q8WUY3 3088 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 A0A0U1RQG5 324 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 RAB11FIP3O75154 756 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 CCDC144BQ3MJ40 725 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 SNRNP48Q6IEG0 339 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 FAM126BQ8IXS8 530 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 TMEM199Q8N511 208 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 ZNF454Q8N9F8 522 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 DDX11Q96FC9 970 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 NUP88Q99567 741 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 HAUS7Q99871 368 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 PUS7LQ9H0K6 701 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 PRDM12Q9H4Q4 367 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 IL23AQ9NPF7 189 aa9.72□□□□□ -0.85
NPLOC4-211ENST00000573212 IGKV6D-41A0A0C4DH26 115 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 C6orf222P0C671 652 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 ACRP10323 421 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 RASA1P20936 1047 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 PSRC1Q6PGN9 363 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 CHST13Q8NET6 341 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 PANK1Q8TE04 598 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 VWCEQ96DN2 955 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 STRBPQ96SI9 672 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 SLC38A10Q9HBR0 1119 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 CXXC1Q9P0U4 656 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 ZHX1Q9UKY1 873 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 SLC4A4Q9Y6R1 1079 aa9.71□□□□□ -0.86
NPLOC4-211ENST00000573212 RCCD1A6NED2 376 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 GSG1L2A8MUP6 293 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 ZBED4O75132 1171 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 NDUFB10O96000 172 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 FGBP02675 491 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 CYP2C18P33260 490 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 MRPS5P82675 430 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 RAB30Q15771 203 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 GNASQ5JWF2 1037 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 GIMAP6Q6P9H5 292 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 CCDC129Q6ZRS4 1044 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 ARMCX2Q7L311 632 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 AMOTL1Q8IY63 956 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 CPXCR1Q8N123 301 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 VTI1AQ96AJ9 217 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
NPLOC4-211ENST00000573212 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.7□□□□□ -0.863e-8■■□□□ 12.8
NPLOC4-211ENST00000573212 SPC25Q9HBM1 224 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms