RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LRRC2Q9BYS8 371 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 ELP3Q9H9T3 547 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 EPB41L4AQ9HCS5 686 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-210ENST00000567654 PDRG1Q9NUG6 133 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 DNAJB12Q9NXW2 375 aaKnown RBP6.81□□□□□ -1.32
SF3B3-210ENST00000567654 CNTN3Q9P232 1028 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 TPCN1Q9ULQ1 816 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 TACC3Q9Y6A5 838 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 FER1L6Q2WGJ9 1857 aa6.81□□□□□ -1.32
SF3B3-210ENST00000567654 KLRG2A4D1S0 409 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 E7EWF7 191 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 SMIM22K7EJ46 135 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 NDUFB5O43674 189 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 PRKAB2O43741 272 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 SIN3BO75182 1162 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 MBD4O95243 580 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 FGAP02671 866 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 MMP10P09238 476 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 PCSK2P16519 638 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 HOXA10P31260 410 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 ADH7P40394 386 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 TTF1Q15361 905 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 SLC15A2Q16348 729 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 GRIK5Q16478 980 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 ME3Q16798 604 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 COL13A1Q5TAT6 717 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 BLOC1S2Q6QNY1 142 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 TICAM2Q86XR7 235 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 GJD3Q8N144 294 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 LCORLQ8N3X6 602 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 NECAB1Q8N987 351 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 RPGRQ92834 1020 aaKnown RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 TNPO1Q92973 898 aaKnown RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 NSUN5Q96P11 429 aaKnown RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 STRBPQ96SI9 672 aaKnown RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 ANKRD2Q9GZV1 360 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 ARMT1Q9H993 441 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 KANSL3Q9P2N6 904 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 GDF2Q9UK05 429 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 NAGPAQ9UK23 515 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 FNDC3AQ9Y2H6 1198 aaKnown RBP6.8□□□□□ -1.32
SF3B3-210ENST00000567654 CYP46A1Q9Y6A2 500 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 MYH4Q9Y623 1939 aa6.8□□□□□ -1.32
SF3B3-210ENST00000567654 SNED1Q8TER0 1413 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 PATL2C9JE40 543 aaKnown RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 J3QW42 95 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 GPR182O15218 404 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 HSP90AA1P07900 732 aaKnown RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 CPB1P15086 417 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 ZKSCAN1P17029 563 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 AMPD1P23109 780 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 HIBADHP31937 336 aaKnown RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 MCM2P49736 904 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 DYNLL1P63167 89 aaKnown RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 INSM1Q01101 510 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 MAP3K10Q02779 954 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 ZSCAN25Q6NSZ9 544 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 Q6ZUG5 572 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 C8orf86Q6ZUL3 223 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 SND1Q7KZF4 910 aaKnown RBP eCLIP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 CHST3Q7LGC8 479 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 TBC1D10CQ8IV04 446 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 CCDC83Q8IWF9 413 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 C1orf127Q8N9H9 656 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 MIGA1Q8NAN2 632 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 TTC16Q8NEE8 873 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 TNFRSF25Q93038 417 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 RBM17Q96I25 401 aaKnown RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 NEK1Q96PY6 1258 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.327e-8■■□□□ 12.3
SF3B3-210ENST00000567654 AVENQ9NQS1 362 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 INCENPQ9NQS7 918 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-210ENST00000567654 ABCF2Q9UG63 623 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 SLC6A14Q9UN76 642 aa6.79□□□□□ -1.32
SF3B3-210ENST00000567654 XDHP47989 1333 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 GOLGB1Q14789 3259 aaKnown RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ELOA3DA6NLF2 546 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 GSG1L2A8MUP6 293 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 UFL1O94874 794 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ARHGEF15O94989 841 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 SRGNP10124 158 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 CYP7A1P22680 504 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 PRDX5P30044 214 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 MCM4P33991 863 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ANTXR2P58335 489 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 EXOSC10Q01780 885 aaKnown RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 CHAF1AQ13111 956 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ORC1Q13415 861 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 CAVIN4Q5BKX8 364 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 TTC39BQ5VTQ0 682 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 NLGN1Q8N2Q7 840 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 NEDD1Q8NHV4 660 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 TBC1D16Q8TBP0 767 aa6.78□□□□□ -1.32
SF3B3-210ENST00000567654 NSUN4Q96CB9 384 aaKnown RBP6.78□□□□□ -1.32
SF3B3-210ENST00000567654 CRAMP1Q96RY5 1269 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms