RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 IQCA1Q86XH1 822 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 KLHDC9Q8NEP7 349 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 TNKSO95271 1327 aa17.2■□□□□ 0.34
FANCA-220ENST00000566409 LTBP2Q14767 1821 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 A0A1W2PPC1 479 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 MYADML2A6NDP7 307 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
FANCA-220ENST00000566409 CYP21A2P08686 494 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 NSMFQ6X4W1 530 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 CYB5R4Q7L1T6 521 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 RNF180Q86T96 592 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 CLEC4DQ8WXI8 215 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 KRT23Q9C075 422 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 ATP11BQ9Y2G3 1177 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 MYH6P13533 1939 aa17.19■□□□□ 0.34
FANCA-220ENST00000566409 SOX1O00570 391 aaPredicted RBP17.18■□□□□ 0.34
FANCA-220ENST00000566409 BAATQ14032 418 aaPredicted RBP17.18■□□□□ 0.34
FANCA-220ENST00000566409 SEC23AQ15436 765 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 TRIM60Q495X7 471 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 GPATCH4Q5T3I0 446 aaKnown RBP17.18■□□□□ 0.34
FANCA-220ENST00000566409 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 KAT14Q9H8E8 782 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 CNNM2Q9H8M5 875 aa17.18■□□□□ 0.34
FANCA-220ENST00000566409 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.17■□□□□ 0.34
FANCA-220ENST00000566409 A0A1W2PQ45 241 aaPredicted RBP17.17■□□□□ 0.34
FANCA-220ENST00000566409 A0A1W2PQY0 241 aa17.17■□□□□ 0.34
FANCA-220ENST00000566409 CTAGE5O15320 804 aa17.17■□□□□ 0.34
FANCA-220ENST00000566409 PTGS1P23219 599 aa17.17■□□□□ 0.34
FANCA-220ENST00000566409 ACLYP53396 1101 aa17.17■□□□□ 0.34
FANCA-220ENST00000566409 MDM2Q00987 491 aaPredicted RBP17.17■□□□□ 0.34
FANCA-220ENST00000566409 TMEM63BQ5T3F8 832 aa17.17■□□□□ 0.34
FANCA-220ENST00000566409 UPF3AQ9H1J1 476 aaKnown RBP17.17■□□□□ 0.34
FANCA-220ENST00000566409 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
FANCA-220ENST00000566409 ASB14A6NK59 587 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 GJA9P57773 515 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 KCNA10Q16322 511 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 TAPT1Q6NXT6 567 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 SLC30A10Q6XR72 485 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 MORC4Q8TE76 937 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 TSEN34Q9BSV6 310 aaKnown RBP17.16■□□□□ 0.34
FANCA-220ENST00000566409 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 PDGFCQ9NRA1 345 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 WDR19Q8NEZ3 1342 aa17.16■□□□□ 0.34
FANCA-220ENST00000566409 CST5P28325 142 aaPredicted RBP17.15■□□□□ 0.34
FANCA-220ENST00000566409 TLE2Q04725 743 aa17.15■□□□□ 0.34
FANCA-220ENST00000566409 EEPD1Q7L9B9 569 aa17.15■□□□□ 0.34
FANCA-220ENST00000566409 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
FANCA-220ENST00000566409 STAG2Q8N3U4 1231 aa17.15■□□□□ 0.34
FANCA-220ENST00000566409 UBAC1Q9BSL1 405 aa17.15■□□□□ 0.34
FANCA-220ENST00000566409 UBE2OQ9C0C9 1292 aaKnown RBP17.15■□□□□ 0.34
FANCA-220ENST00000566409 PDLIM7Q9NR12 457 aa17.15■□□□□ 0.34
FANCA-220ENST00000566409 GNEQ9Y223 722 aaKnown RBP17.15■□□□□ 0.34
FANCA-220ENST00000566409 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
FANCA-220ENST00000566409 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 E7EWF7 191 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
FANCA-220ENST00000566409 SMPD1P17405 629 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 NKX3-2P78367 333 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 ASPRV1Q53RT3 343 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 IFIT1BQ5T764 474 aaKnown RBP17.14■□□□□ 0.33
FANCA-220ENST00000566409 FBXO16Q8IX29 292 aaPredicted RBP17.14■□□□□ 0.33
FANCA-220ENST00000566409 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 TRIM43Q96BQ3 446 aaPredicted RBP17.14■□□□□ 0.33
FANCA-220ENST00000566409 LRCH3Q96II8 777 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 JMJD4Q9H9V9 463 aa17.14■□□□□ 0.33
FANCA-220ENST00000566409 MOXD2PA6NHM9 499 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 PARP1P09874 1014 aaKnown RBP17.13■□□□□ 0.33
FANCA-220ENST00000566409 ITGB8P26012 769 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 CALML3P27482 149 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 ALDH5A1P51649 535 aaPredicted RBP17.13■□□□□ 0.33
FANCA-220ENST00000566409 RPS6P62753 249 aaKnown RBP17.13■□□□□ 0.33
FANCA-220ENST00000566409 BEX3Q00994 111 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
FANCA-220ENST00000566409 CDC37Q16543 378 aaPredicted RBP17.13■□□□□ 0.33
FANCA-220ENST00000566409 SLC35G1Q2M3R5 365 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 USH1GQ495M9 461 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 RNF207Q6ZRF8 634 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 TDHQ8IZJ6 230 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 MAD2L2Q9UI95 211 aa17.13■□□□□ 0.33
FANCA-220ENST00000566409 ASGR1P07306 291 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 ANTXR2P58335 489 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 LSG1Q9H089 658 aaKnown RBP17.12■□□□□ 0.33
FANCA-220ENST00000566409 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
FANCA-220ENST00000566409 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 PNMA2Q9UL42 364 aa17.12■□□□□ 0.33
FANCA-220ENST00000566409 RBM8AQ9Y5S9 174 aaKnown RBP17.12■□□□□ 0.33
FANCA-220ENST00000566409 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms