RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 NASPP49321 788 aaPredicted RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 GMPSP49915 693 aaPredicted RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 SNAP25P60880 206 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 ZNF174Q15697 407 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 TBC1D10BQ4KMP7 808 aaPredicted RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 TATDN1Q6P1N9 297 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 ADGRD1Q6QNK2 874 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 ARHGAP27Q6ZUM4 889 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 FOXP4Q8IVH2 680 aaPredicted RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 SPICE1Q8N0Z3 855 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 FSIP1Q8NA03 581 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 ENGASEQ8NFI3 743 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 FOXP1Q9H334 677 aaPredicted RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 HDAC9Q9UKV0 1011 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 ISY1Q9ULR0 285 aaKnown RBP7.15□□□□□ -1.27
CHD9-217ENST00000565832 FZD1Q9UP38 647 aa7.15□□□□□ -1.27
CHD9-217ENST00000565832 MYH4Q9Y623 1939 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 KRT2P35908 639 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 ECE1P42892 770 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 MRE11P49959 708 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 LSM11P83369 360 aaKnown RBP eCLIP7.14□□□□□ -1.27
CHD9-217ENST00000565832 ABCB5Q2M3G0 1257 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 CCDC178Q5BJE1 867 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 ATL3Q6DD88 541 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 ADALQ6DHV7 355 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 DLK2Q6UY11 383 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 PIK3AP1Q6ZUJ8 805 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 USP49Q70CQ1 688 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 AGBL3Q8NEM8 1001 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 LRRN4Q8WUT4 740 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 TNFRSF25Q93038 417 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 COA7Q96BR5 231 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 CCDC97Q96F63 343 aaPredicted RBP7.14□□□□□ -1.27
CHD9-217ENST00000565832 EHD4Q9H223 541 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.14□□□□□ -1.273e-7■■■■■ 34.2
CHD9-217ENST00000565832 PRM3Q9NNZ6 103 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 CNOT7Q9UIV1 285 aaKnown RBP7.14□□□□□ -1.27
CHD9-217ENST00000565832 PSME4Q14997 1843 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 MYO3BQ8WXR4 1341 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 ZNF541Q9H0D2 1346 aa7.14□□□□□ -1.27
CHD9-217ENST00000565832 POM121CA8CG34 1229 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 ENTPD3O75355 529 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 XBP1P17861 261 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 KIAA1755Q5JYT7 1200 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 SHC4Q6S5L8 630 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 METTL16Q86W50 562 aaKnown RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 ADGRF4Q8IZF3 695 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 FMR1NBQ8N0W7 255 aaPredicted RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 ACER1Q8TDN7 264 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 FAM151AQ8WW52 585 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 SYAP1Q96A49 352 aaPredicted RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 LRCH3Q96II8 777 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 NUP62CLQ9H1M0 184 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 VPS33BQ9H267 617 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 TNMDQ9H2S6 317 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 USP17L10C9JJH3 530 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 FZD9O00144 591 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 STXBP3O00186 592 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 YEATS4O95619 227 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 TAL1P17542 331 aaPredicted RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 RASA3Q14644 834 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 TNIP1Q15025 636 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 ILDR2Q71H61 639 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 KCNG4Q8TDN1 519 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 ZBED3Q96IU2 234 aaPredicted RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 FUCA2Q9BTY2 467 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 GLIS2Q9BZE0 524 aaPredicted RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 TSPY26PQ9H489 355 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 JMJD4Q9H9V9 463 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 SPON1Q9HCB6 807 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 TMOD2Q9NZR1 351 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 PGAP2Q9UHJ9 254 aa7.13□□□□□ -1.27
CHD9-217ENST00000565832 POLR2AP24928 1970 aaKnown RBP7.13□□□□□ -1.27
CHD9-217ENST00000565832 F5H6K3 240 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 SNHG28P0DPA3 235 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 PFKFB1P16118 471 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 GNAQP50148 359 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 ICA1Q05084 483 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 KLRC3Q07444 240 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 ZNF543Q08ER8 600 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 ZYXQ15942 572 aaKnown RBP7.12□□□□□ -1.27
CHD9-217ENST00000565832 CCDC96Q2M329 555 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 KMT5BQ4FZB7 885 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 RILPL1Q5EBL4 403 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 L1TD1Q5T7N2 865 aaKnown RBP7.12□□□□□ -1.27
CHD9-217ENST00000565832 ISM2Q6H9L7 571 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 MRPS27Q92552 414 aaKnown RBP7.12□□□□□ -1.27
CHD9-217ENST00000565832 CCDC17Q96LX7 622 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 SPZ1Q9BXG8 430 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 CLSTN2Q9H4D0 955 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 RIOX1Q9H6W3 641 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.12□□□□□ -1.27
CHD9-217ENST00000565832 BARHL2Q9NY43 387 aa7.12□□□□□ -1.27
CHD9-217ENST00000565832 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
CHD9-217ENST00000565832 PCDHA6Q9UN73 950 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms