RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ASNSP08243 561 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 FBXO45P0C2W1 286 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 POU3F3P20264 500 aaPredicted RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 ADORA2AP29274 412 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 NFX1Q12986 1120 aaKnown RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 RRP1BQ14684 758 aaKnown RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 PUM3Q15397 648 aaKnown RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 LRRC24Q50LG9 513 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 HFE2Q6ZVN8 426 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 OTOP2Q7RTS6 562 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 DZIP1Q86YF9 867 aaKnown RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 FAM178BQ8IXR5 827 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 ANKS1AQ92625 1134 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 VTI1AQ96AJ9 217 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 PRM3Q9NNZ6 103 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 IL23AQ9NPF7 189 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 SLC5A4Q9NY91 659 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 C9orf78Q9NZ63 289 aaPredicted RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 NXF1Q9UBU9 619 aaKnown RBP6.61□□□□□ -1.35
HERC1-213ENST00000561359 PCDHA11Q9Y5I1 949 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 SLC4A7Q9Y6M7 1214 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 TRIOO75962 3097 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 PHIPQ8WWQ0 1821 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 A0A1B0GUL6 1792 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 LRRC37A2A6NM11 1700 aa6.61□□□□□ -1.35
HERC1-213ENST00000561359 CACNA1HO95180 2353 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 RFX7Q2KHR2 1363 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 LOC285556D6RIA3 1793 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 MROH7Q68CQ1 1323 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 GRM8O00222 908 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 IGHA2P01877 340 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 CYP2C18P33260 490 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 BTDP43251 543 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 USP17L2Q6R6M4 530 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 VGLL2Q8N8G2 317 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 ARNTL2Q8WYA1 636 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 TMPRSS4Q9NRS4 437 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 GNL3LQ9NVN8 582 aaKnown RBP6.6□□□□□ -1.35
HERC1-213ENST00000561359 DOCK2Q92608 1830 aa6.6□□□□□ -1.35
HERC1-213ENST00000561359 TPRP12270 2363 aaKnown RBP6.59□□□□□ -1.35
HERC1-213ENST00000561359 GAKO14976 1311 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 KIF16BQ96L93 1317 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 ZNF318Q5VUA4 2279 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 EPOPA6NHQ4 379 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L15C9J2P7 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L13C9JLJ4 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L11C9JVI0 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L18D6R9N7 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L22D6RA61 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L17D6RBQ6 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L19D6RCP7 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L20D6RJB6 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 F6X3S4 739 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 ERVH48-1M5A8F1 160 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 STRNO43815 780 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 COBLO75128 1261 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 CA3P07451 260 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 ATP2A2P16615 1042 aaKnown RBP6.59□□□□□ -1.35
HERC1-213ENST00000561359 ACLYP53396 1101 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 RELBQ01201 579 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 USP17L24Q0WX57 530 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 NR1H3Q13133 447 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 WDR43Q15061 677 aaKnown RBP eCLIP6.59□□□□□ -1.35
HERC1-213ENST00000561359 ZYXQ15942 572 aaKnown RBP6.59□□□□□ -1.35
HERC1-213ENST00000561359 TMEM67Q5HYA8 995 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 BEND3Q5T5X7 828 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 ERMP1Q7Z2K6 904 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 ZNF592Q92610 1267 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 FEZ1Q99689 392 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 BTBD7Q9P203 1132 aa6.59□□□□□ -1.35
HERC1-213ENST00000561359 HERC5Q9UII4 1024 aaKnown RBP6.59□□□□□ -1.35
HERC1-213ENST00000561359 TTLL8A6PVC2 850 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 TLR3O15455 904 aaKnown RBP6.58□□□□□ -1.36
HERC1-213ENST00000561359 GDF11O95390 407 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 FGFR2P21802 821 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 KCNA5P22460 613 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 TWISTNBQ3B726 338 aaPredicted RBP6.58□□□□□ -1.36
HERC1-213ENST00000561359 Q6ZVU0 165 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 ZGPATQ8N5A5 531 aaKnown RBP6.58□□□□□ -1.36
HERC1-213ENST00000561359 PRSS33Q8NF86 280 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 LPIN2Q92539 896 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 LENG1Q96BZ8 264 aaPredicted RBP6.58□□□□□ -1.36
HERC1-213ENST00000561359 SUCLG2Q96I99 432 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 AGBL1Q96MI9 1066 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 GLT1D1Q96MS3 346 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 UBE2ZQ9H832 354 aaPredicted RBP6.58□□□□□ -1.36
HERC1-213ENST00000561359 ABCF2Q9UG63 623 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 DENND2AQ9ULE3 1009 aa6.58□□□□□ -1.36
HERC1-213ENST00000561359 ZNF536O15090 1300 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 SALL1Q9NSC2 1324 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 FIGNL2A6NMB9 653 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 ESPNB1AK53 854 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 KRT37O76014 449 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 AKR1A1P14550 325 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 IL9P15248 144 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 CCL23P55773 120 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 RHBDL3P58872 404 aa6.57□□□□□ -1.36
HERC1-213ENST00000561359 JAG1P78504 1218 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms