RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 SNAI1O95863 264 aaPredicted RBP8.11□□□□□ -1.11
SPG11-224ENST00000561268 PGK2P07205 417 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 PDHBP11177 359 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 TOP1P11387 765 aaKnown RBP8.11□□□□□ -1.11
SPG11-224ENST00000561268 SLC1A4P43007 532 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 PWP2Q15269 919 aaKnown RBP8.11□□□□□ -1.11
SPG11-224ENST00000561268 LRRC41Q15345 812 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 TTC22Q5TAA0 569 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 CCSAPQ6IQ19 270 aaPredicted RBP8.11□□□□□ -1.11
SPG11-224ENST00000561268 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 MORC4Q8TE76 937 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 CHURC1Q8WUH1 139 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 UPF3AQ9H1J1 476 aaKnown RBP8.11□□□□□ -1.11
SPG11-224ENST00000561268 A1CFQ9NQ94 594 aaKnown RBP8.11□□□□□ -1.11
SPG11-224ENST00000561268 INCENPQ9NQS7 918 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 PHF24Q9UPV7 400 aa8.11□□□□□ -1.11
SPG11-224ENST00000561268 SYNRGQ9UMZ2 1314 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 TMEM232C9JQI7 657 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 CTAGE5O15320 804 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 ZBED4O75132 1171 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 ICAM1P05362 532 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 AKR1A1P14550 325 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 TAL1P17542 331 aaPredicted RBP8.1□□□□□ -1.11
SPG11-224ENST00000561268 MAGEA10P43363 369 aaPredicted RBP8.1□□□□□ -1.11
SPG11-224ENST00000561268 GPR153Q6NV75 609 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 ARRDC4Q8NCT1 418 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 KLHDC9Q8NEP7 349 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 IL27Q8NEV9 243 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 TET1Q8NFU7 2136 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 ANKS1AQ92625 1134 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 TTC14Q96N46 770 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 TMEM47Q9BQJ4 181 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 RNF41Q9H4P4 317 aaPredicted RBP8.1□□□□□ -1.11
SPG11-224ENST00000561268 ACAD9Q9H845 621 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 RAVER2Q9HCJ3 691 aaKnown RBP8.1□□□□□ -1.11
SPG11-224ENST00000561268 RNF146Q9NTX7 359 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 PRR12Q9ULL5 1215 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 MICAL3Q7RTP6 2002 aa8.1□□□□□ -1.11
SPG11-224ENST00000561268 KAT6AQ92794 2004 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 KBTBD13C9JR72 458 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 RANBP6O60518 1105 aaKnown RBP8.09□□□□□ -1.11
SPG11-224ENST00000561268 DUSP11O75319 330 aaKnown RBP8.09□□□□□ -1.11
SPG11-224ENST00000561268 RARBP10826 455 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 MCCP23508 829 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 PSEN1P49768 467 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 RTP1P59025 263 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 ZNF543Q08ER8 600 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 GSE1Q14687 1217 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 LRIT3Q3SXY7 679 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 PRAMEF19Q5SWL8 479 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 ARMCX2Q7L311 632 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 CPXCR1Q8N123 301 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 TSEN34Q9BSV6 310 aaKnown RBP8.09□□□□□ -1.11
SPG11-224ENST00000561268 MAF1Q9H063 256 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 ABHD16BQ9H3Z7 469 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 XPNPEP3Q9NQH7 507 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 DIAPH3Q9NSV4 1193 aa8.09□□□□□ -1.11
SPG11-224ENST00000561268 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
SPG11-224ENST00000561268 ZMYND8Q9ULU4 1186 aaPredicted RBP8.09□□□□□ -1.11
SPG11-224ENST00000561268 A0A1W2PQ45 241 aaPredicted RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 A0A1W2PQY0 241 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 SOWAHBA6NEL2 793 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 MOXD2PA6NHM9 499 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 SOX1O00570 391 aaPredicted RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 RAD21O60216 631 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 EDNRBP24530 442 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 CNGA1P29973 690 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 HAND2P61296 217 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 GHRHRQ02643 423 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 MUM1L1Q5H9M0 696 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 GPATCH4Q5T3I0 446 aaKnown RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 GJC2Q5T442 439 aaPredicted RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 SYDE2Q5VT97 1194 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 CWC27Q6UX04 472 aaKnown RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 SLC39A5Q6ZMH5 540 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 MFSD6Q6ZSS7 791 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 DGKHQ86XP1 1220 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 TDHQ8IZJ6 230 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 ESR2Q92731 530 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 RILPL2Q969X0 211 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 CYP39A1Q9NYL5 469 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 PNMA2Q9UL42 364 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 ISY1Q9ULR0 285 aaKnown RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 CNPY2Q9Y2B0 182 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 MYO9BQ13459 2157 aa8.08□□□□□ -1.12
SPG11-224ENST00000561268 COL4A4P53420 1690 aaPredicted RBP8.08□□□□□ -1.12
SPG11-224ENST00000561268 ATG2AQ2TAZ0 1938 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 LOXHD1Q8IVV2 1947 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 MYADML2A6NDP7 307 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 SYN1P17600 705 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 GJA9P57773 515 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms