RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 FAM160B2Q86V87 743 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 LRRC47Q8N1G4 583 aaKnown RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 NEDD1Q8NHV4 660 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 UHRF1Q96T88 793 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 TSPYL2Q9H2G4 693 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 A1CFQ9NQ94 594 aaKnown RBP14.15□□□□□ -0.14
ACTN1-221ENST00000556571 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 Q9Y3F1 56 aa14.15□□□□□ -0.14
ACTN1-221ENST00000556571 SOWAHBA6NEL2 793 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 DYNC1LI2O43237 492 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 GPAA1O43292 621 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 TSPY3P0CV98 308 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 TSPY8P0CW00 308 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 SMPD1P17405 629 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 CCL23P55773 120 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 STAG1Q8WVM7 1258 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 GMCL1Q96IK5 515 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 AGBL1Q96MI9 1066 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 TRERF1Q96PN7 1200 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 NOC4LQ9BVI4 516 aaKnown RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 EPB41L4AQ9HCS5 686 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 YBX2Q9Y2T7 364 aaKnown RBP14.14□□□□□ -0.15
ACTN1-221ENST00000556571 SLC4A7Q9Y6M7 1214 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 ZNF536O15090 1300 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 GRIN2DO15399 1336 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 UMODL1Q5DID0 1318 aa14.14□□□□□ -0.15
ACTN1-221ENST00000556571 PLA2G6O60733 806 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 SLC3A2P08195 630 aaKnown RBP14.13□□□□□ -0.15
ACTN1-221ENST00000556571 SLC1A4P43007 532 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 PDE4BQ07343 736 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-221ENST00000556571 LRRFIP1Q32MZ4 808 aaKnown RBP14.13□□□□□ -0.15
ACTN1-221ENST00000556571 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 IFNL3Q8IZI9 196 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 GPATCH3Q96I76 525 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 NACAP1Q9BZK3 213 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 TRPV6Q9H1D0 765 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 PCDHA11Q9Y5I1 949 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 MCM3APO60318 1980 aa14.13□□□□□ -0.15
ACTN1-221ENST00000556571 PLIN4Q96Q06 1357 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 B4GALT4O60513 344 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 ALAS1P13196 640 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 TFAP4Q01664 338 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 PPP2R2DQ66LE6 453 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 TAPT1Q6NXT6 567 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 WNT8AQ9H1J5 351 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 PDGFCQ9NRA1 345 aa14.12□□□□□ -0.15
ACTN1-221ENST00000556571 M0R2C6 588 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 PFKMP08237 780 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 SUPT20HL2P0C7V6 817 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 MCCP23508 829 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 RABGGTBP53611 331 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 PSMC6P62333 389 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 RCSD1Q6JBY9 416 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 EEPD1Q7L9B9 569 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 ALDH8A1Q9H2A2 487 aaPredicted RBP14.11□□□□□ -0.15
ACTN1-221ENST00000556571 VTA1Q9NP79 307 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 MYH7P12883 1935 aa14.11□□□□□ -0.15
ACTN1-221ENST00000556571 CHD7Q9P2D1 2997 aa14.1□□□□□ -0.15
ACTN1-221ENST00000556571 ZBBXA8MT70 800 aa14.1□□□□□ -0.15
ACTN1-221ENST00000556571 ATP2A2P16615 1042 aaKnown RBP14.1□□□□□ -0.15
ACTN1-221ENST00000556571 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
ACTN1-221ENST00000556571 FBXO16Q8IX29 292 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-221ENST00000556571 MORC4Q8TE76 937 aa14.1□□□□□ -0.15
ACTN1-221ENST00000556571 SCLYQ96I15 445 aa14.1□□□□□ -0.15
ACTN1-221ENST00000556571 BMP1P13497 986 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 MYOGP15173 224 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 PTGS1P23219 599 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 PPARAQ07869 468 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 DUSP28Q4G0W2 176 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 MUM1L1Q5H9M0 696 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 TMEM67Q5HYA8 995 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 NSMFQ6X4W1 530 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 KCTD1Q719H9 257 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 MICALL1Q8N3F8 863 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 VWCEQ96DN2 955 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 C1QTNF1Q9BXJ1 281 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 NAPBQ9H115 298 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 ADD3Q9UEY8 706 aaKnown RBP14.09□□□□□ -0.15
ACTN1-221ENST00000556571 RAPGEFL1Q9UHV5 662 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 PRR12Q9ULL5 1215 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 STX8Q9UNK0 236 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 DDX49Q9Y6V7 483 aaKnown RBP14.09□□□□□ -0.15
ACTN1-221ENST00000556571 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
ACTN1-221ENST00000556571 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-221ENST00000556571 TTLL4Q14679 1199 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
ACTN1-221ENST00000556571 TMEM63BQ5T3F8 832 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 CHMP4CQ96CF2 233 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 DCTPP1Q9H773 170 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 TRMT13Q9NUP7 481 aaKnown RBP14.08□□□□□ -0.16
ACTN1-221ENST00000556571 CCPG1Q9ULG6 757 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms