RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GRIN2DO15399 1336 aa16.65■□□□□ 0.26
ACTN1-219ENST00000556432 PFKMP08237 780 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 SMPD1P17405 629 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 OAZ1P54368 228 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 NKX3-2P78367 333 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 UBE3CQ15386 1083 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 KRT40Q6A162 431 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 EEPD1Q7L9B9 569 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
ACTN1-219ENST00000556432 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
ACTN1-219ENST00000556432 ARIH1Q9Y4X5 557 aaPredicted RBP16.64■□□□□ 0.25
ACTN1-219ENST00000556432 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
ACTN1-219ENST00000556432 FAM86C2PA6NEL3 165 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 CYP2C9P11712 490 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 ACTN1P12814 892 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-219ENST00000556432 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 HLA-CQ95604 372 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
ACTN1-219ENST00000556432 ALDH8A1Q9H2A2 487 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-219ENST00000556432 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
ACTN1-219ENST00000556432 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
ACTN1-219ENST00000556432 TRANK1O15050 2925 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 PIEZO1Q92508 2521 aa16.63■□□□□ 0.25
ACTN1-219ENST00000556432 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 EPOPA6NHQ4 379 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 ATP5JP18859 108 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-219ENST00000556432 AGBL1Q96MI9 1066 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 HAUS7Q99871 368 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 PDGFCQ9NRA1 345 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
ACTN1-219ENST00000556432 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-219ENST00000556432 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
ACTN1-219ENST00000556432 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 HMMRO75330 724 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 PRDM1O75626 825 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 BMP3P12645 472 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 ALAS1P13196 640 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 STAT2P52630 851 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 FAM47CQ5HY64 1035 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 IQSEC1Q6DN90 963 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 SLC9A7Q96T83 725 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
ACTN1-219ENST00000556432 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 MUC6Q6W4X9 2439 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 TNKSO95271 1327 aa16.61■□□□□ 0.25
ACTN1-219ENST00000556432 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 KIF28PB7ZC32 967 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 TLL1O43897 1013 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 TTLL1O95922 423 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 MYL3P08590 195 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 FDX1P10109 184 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 POU3F3P20264 500 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-219ENST00000556432 TDO2P48775 406 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 SBK1Q52WX2 424 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 GMCL1P1Q8NEA9 526 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 PANK1Q8TE04 598 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 TRERF1Q96PN7 1200 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-219ENST00000556432 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
ACTN1-219ENST00000556432 MYH7P12883 1935 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 TAP1Q03518 808 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 CHURC1Q8WUH1 139 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 VWCEQ96DN2 955 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
ACTN1-219ENST00000556432 POLR3EQ9NVU0 708 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 Q9Y3F1 56 aa16.59■□□□□ 0.25
ACTN1-219ENST00000556432 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 GPR37L1O60883 481 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 APPP05067 770 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 TMEM63BQ5T3F8 832 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 TAPT1Q6NXT6 567 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 FAM160B2Q86V87 743 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-219ENST00000556432 MKL1Q969V6 931 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
ACTN1-219ENST00000556432 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 ARHGEF15O94989 841 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 RFC2P35250 354 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 SLC1A4P43007 532 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 SNAP25P60880 206 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 GRB10Q13322 594 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 GIMAP6Q6P9H5 292 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 PHOSPHO2Q8TCD6 241 aa16.57■□□□□ 0.24
ACTN1-219ENST00000556432 KHSRPQ92945 711 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms