RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 IQCA1Q86XH1 822 aa20.18■□□□□ 0.82
GPHN-211ENST00000556020 LRRC37A2A6NM11 1700 aa20.18■□□□□ 0.82
GPHN-211ENST00000556020 ASB14A6NK59 587 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 PQBP1O60828 265 aaKnown RBP20.17■□□□□ 0.82
GPHN-211ENST00000556020 KCNA10Q16322 511 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 EEPD1Q7L9B9 569 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 SH3RF1Q7Z6J0 888 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 KATNBL1Q9H079 304 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 CPVLQ9H3G5 476 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 SPC25Q9HBM1 224 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 STARD7Q9NQZ5 370 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 PDLIM7Q9NR12 457 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 ASTN1O14525 1302 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 SZT2Q5T011 3432 aa20.17■□□□□ 0.82
GPHN-211ENST00000556020 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 NFIBO00712 420 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
GPHN-211ENST00000556020 DGKHQ86XP1 1220 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 PNMA1Q8ND90 353 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 KLHDC9Q8NEP7 349 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 VTI1AQ96AJ9 217 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 ZSCAN10Q96SZ4 725 aaPredicted RBP20.16■□□□□ 0.82
GPHN-211ENST00000556020 TSEN34Q9BSV6 310 aaKnown RBP20.16■□□□□ 0.82
GPHN-211ENST00000556020 UBA5Q9GZZ9 404 aa20.16■□□□□ 0.82
GPHN-211ENST00000556020 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.15■□□□□ 0.82
GPHN-211ENST00000556020 SNHG28P0DPA3 235 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 TNFAIP2Q03169 654 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 CCDC178Q5BJE1 867 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 GNASQ5JWF2 1037 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 C1orf53Q5VUE5 145 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 FBXO16Q8IX29 292 aaPredicted RBP20.15■□□□□ 0.82
GPHN-211ENST00000556020 NUP133Q8WUM0 1156 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 BADQ92934 168 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 KRT23Q9C075 422 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 ZSWIM5Q9P217 1185 aa20.15■□□□□ 0.82
GPHN-211ENST00000556020 TNKSO95271 1327 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 TRIM43BA6NCK2 446 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 CLTBP09497 229 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 CALML3P27482 149 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 BEX3Q00994 111 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 LRIT3Q3SXY7 679 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 USH1GQ495M9 461 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 GPATCH4Q5T3I0 446 aaKnown RBP20.14■□□□□ 0.81
GPHN-211ENST00000556020 ENAHQ8N8S7 591 aaPredicted RBP20.14■□□□□ 0.81
GPHN-211ENST00000556020 PCSK9Q8NBP7 692 aaKnown RBP20.14■□□□□ 0.81
GPHN-211ENST00000556020 TRIM43Q96BQ3 446 aaPredicted RBP20.14■□□□□ 0.81
GPHN-211ENST00000556020 UBAC1Q9BSL1 405 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 PDGFCQ9NRA1 345 aa20.14■□□□□ 0.81
GPHN-211ENST00000556020 RAD50Q92878 1312 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 DHX16O60231 1041 aaKnown RBP20.13■□□□□ 0.81
GPHN-211ENST00000556020 ASGR1P07306 291 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 PTGS1P23219 599 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 GJA9P57773 515 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 CCSAPQ6IQ19 270 aaPredicted RBP20.13■□□□□ 0.81
GPHN-211ENST00000556020 SLC30A10Q6XR72 485 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 RUFY2Q8WXA3 655 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 GLT1D1Q96MS3 346 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
GPHN-211ENST00000556020 CNNM2Q9H8M5 875 aa20.13■□□□□ 0.81
GPHN-211ENST00000556020 MYH6P13533 1939 aa20.12■□□□□ 0.81
GPHN-211ENST00000556020 CHMLP26374 656 aa20.12■□□□□ 0.81
GPHN-211ENST00000556020 CST5P28325 142 aaPredicted RBP20.12■□□□□ 0.81
GPHN-211ENST00000556020 NT5C2P49902 561 aa20.12■□□□□ 0.81
GPHN-211ENST00000556020 RNF207Q6ZRF8 634 aa20.12■□□□□ 0.81
GPHN-211ENST00000556020 CLEC4DQ8WXI8 215 aa20.12■□□□□ 0.81
GPHN-211ENST00000556020 ADD3Q9UEY8 706 aaKnown RBP20.12■□□□□ 0.81
GPHN-211ENST00000556020 SMPD1P17405 629 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 ALDH5A1P51649 535 aaPredicted RBP20.11■□□□□ 0.81
GPHN-211ENST00000556020 PTH1RQ03431 593 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 CDC37Q16543 378 aaPredicted RBP20.11■□□□□ 0.81
GPHN-211ENST00000556020 TMEM63BQ5T3F8 832 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 Q7L0L9 218 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 TLK2Q86UE8 772 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 ANKS1AQ92625 1134 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 AP5M1Q9H0R1 490 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 VAT1LQ9HCJ6 419 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 TMEM39AQ9NV64 488 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 PNMA2Q9UL42 364 aa20.11■□□□□ 0.81
GPHN-211ENST00000556020 WDR19Q8NEZ3 1342 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 DCDC2CA8MYV0 355 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 DYNC1LI2O43237 492 aaPredicted RBP20.1■□□□□ 0.81
GPHN-211ENST00000556020 PARP1P09874 1014 aaKnown RBP20.1■□□□□ 0.81
GPHN-211ENST00000556020 RAG1P15918 1043 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 ITGB8P26012 769 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 ASPRV1Q53RT3 343 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 IFIT1BQ5T764 474 aaKnown RBP20.1■□□□□ 0.81
GPHN-211ENST00000556020 TAPT1Q6NXT6 567 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 KIAA1211Q6ZU35 1233 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 VTA1Q9NP79 307 aa20.1■□□□□ 0.81
GPHN-211ENST00000556020 LAMA3Q16787 3333 aa20.09■□□□□ 0.81
GPHN-211ENST00000556020 CTAGE5O15320 804 aa20.09■□□□□ 0.81
GPHN-211ENST00000556020 RPS6P62753 249 aaKnown RBP20.09■□□□□ 0.81
GPHN-211ENST00000556020 FAAP100Q0VG06 881 aa20.09■□□□□ 0.81
GPHN-211ENST00000556020 TRDNQ13061 729 aa20.09■□□□□ 0.81
GPHN-211ENST00000556020 SHHQ15465 462 aa20.09■□□□□ 0.81
GPHN-211ENST00000556020 FSCN1Q16658 493 aaKnown RBP20.09■□□□□ 0.81
GPHN-211ENST00000556020 C9orf50Q5SZB4 431 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms