RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 KCNA10Q16322 511 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 GPATCH4Q5T3I0 446 aaKnown RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 SYDE2Q5VT97 1194 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 BADQ92934 168 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 TOX2Q96NM4 488 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 SEZ6LQ9BYH1 1024 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 KAT14Q9H8E8 782 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 CNNM2Q9H8M5 875 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 A1CFQ9NQ94 594 aaKnown RBP12.62□□□□□ -0.39
PNN-203ENST00000554117 PDLIM7Q9NR12 457 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
PNN-203ENST00000554117 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
PNN-203ENST00000554117 ADAMTS4O75173 837 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 ASGR1P07306 291 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 CST5P28325 142 aaPredicted RBP12.61□□□□□ -0.39
PNN-203ENST00000554117 GJA9P57773 515 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 NUCB1Q02818 461 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 FPGSQ05932 587 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 TRDNQ13061 729 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 TMEM47Q9BQJ4 181 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 KRT23Q9C075 422 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
PNN-203ENST00000554117 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
PNN-203ENST00000554117 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
PNN-203ENST00000554117 FRMPD2Q68DX3 1309 aaPredicted RBP12.61□□□□□ -0.39
PNN-203ENST00000554117 DOCK5Q9H7D0 1870 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 FGRP09769 529 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 CNTN2Q02246 1040 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 IQSEC1Q6DN90 963 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 TMEM199Q8N511 208 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 RNPC3Q96LT9 517 aaKnown RBP12.6□□□□□ -0.39
PNN-203ENST00000554117 UBAC1Q9BSL1 405 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 RANBP17Q9H2T7 1088 aaKnown RBP12.6□□□□□ -0.39
PNN-203ENST00000554117 SCN5AQ14524 2016 aa12.6□□□□□ -0.39
PNN-203ENST00000554117 ERICH2A1L162 156 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 KIAA0355O15063 1070 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 SLC16A2P36021 539 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 CPT1AP50416 773 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 PDE4DQ08499 809 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 PPIGQ13427 754 aaKnown RBP eCLIP12.59□□□□□ -0.392e-52■■□□□ 13
PNN-203ENST00000554117 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
PNN-203ENST00000554117 BTNL9Q6UXG8 535 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 RNF207Q6ZRF8 634 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 KIAA1211Q6ZU35 1233 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 ANKRD33Q7Z3H0 272 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 ZNF589Q86UQ0 364 aaPredicted RBP12.59□□□□□ -0.39
PNN-203ENST00000554117 DGKHQ86XP1 1220 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 PLEKHM2Q8IWE5 1019 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
PNN-203ENST00000554117 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
PNN-203ENST00000554117 INCENPQ9NQS7 918 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 CYP39A1Q9NYL5 469 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 ZNF536O15090 1300 aa12.59□□□□□ -0.39
PNN-203ENST00000554117 ARVCFO00192 962 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 TIMP1P01033 207 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 PDHBP11177 359 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 CALML3P27482 149 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 SNAP25P60880 206 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 TRAF1Q13077 416 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 FSCN1Q16658 493 aaKnown RBP12.58□□□□□ -0.4
PNN-203ENST00000554117 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 EXOC6Q8TAG9 804 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 MAF1Q9H063 256 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 POLR3EQ9NVU0 708 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 Q9Y3F1 56 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 WDR19Q8NEZ3 1342 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 SCN10AQ9Y5Y9 1956 aa12.58□□□□□ -0.4
PNN-203ENST00000554117 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
PNN-203ENST00000554117 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
PNN-203ENST00000554117 FOXP2O15409 715 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
PNN-203ENST00000554117 KDM4AO75164 1064 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 NOVP48745 357 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 ALDH5A1P51649 535 aaPredicted RBP12.57□□□□□ -0.4
PNN-203ENST00000554117 SMAD3P84022 425 aaKnown RBP12.57□□□□□ -0.4
PNN-203ENST00000554117 ZNF543Q08ER8 600 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 BAATQ14032 418 aaPredicted RBP12.57□□□□□ -0.4
PNN-203ENST00000554117 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
PNN-203ENST00000554117 SHHQ15465 462 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 Q7L0L9 218 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 SH3RF1Q7Z6J0 888 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 DNERQ8NFT8 737 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 ABCB11O95342 1321 aa12.57□□□□□ -0.4
PNN-203ENST00000554117 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 SOWAHBA6NEL2 793 aa12.56□□□□□ -0.4
PNN-203ENST00000554117 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms