RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 EAF2Q96CJ1 260 aaPredicted RBP7.89□□□□□ -1.15
GPHN-206ENST00000553936 ZBED2Q9BTP6 218 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 FTOQ9C0B1 505 aaKnown RBP eCLIP7.89□□□□□ -1.15
GPHN-206ENST00000553936 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.89□□□□□ -1.15
GPHN-206ENST00000553936 ALDH8A1Q9H2A2 487 aaPredicted RBP7.89□□□□□ -1.15
GPHN-206ENST00000553936 ACAD9Q9H845 621 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 TLR7Q9NYK1 1049 aaKnown RBP7.89□□□□□ -1.15
GPHN-206ENST00000553936 FEM1BQ9UK73 627 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 GNEQ9Y223 722 aaKnown RBP7.89□□□□□ -1.15
GPHN-206ENST00000553936 COG6Q9Y2V7 657 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 NOP58Q9Y2X3 529 aaKnown RBP7.89□□□□□ -1.15
GPHN-206ENST00000553936 RIPK3Q9Y572 518 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 GBF1Q92538 1859 aa7.89□□□□□ -1.15
GPHN-206ENST00000553936 MYO9BQ13459 2157 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 TNKSO95271 1327 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 RAD50Q92878 1312 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 COL11A1P12107 1806 aaPredicted RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 PARP14Q460N5 1801 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 F5H6K3 240 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 CTAGE5O15320 804 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 DCXO43602 365 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 CYP2D6P10635 497 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 TRIM27P14373 513 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 CPT1AP50416 773 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 KLRC3Q07444 240 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 LEXMQ3ZCV2 418 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 HSP90AB4PQ58FF6 505 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 C12orf60Q5U649 245 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 KRT40Q6A162 431 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 AACSQ86V21 672 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 TRMT2AQ8IZ69 625 aaKnown RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 CCDC155Q8N6L0 562 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 FRAT1Q92837 279 aaPredicted RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 KHSRPQ92945 711 aaKnown RBP eCLIP7.88□□□□□ -1.15
GPHN-206ENST00000553936 CRBNQ96SW2 442 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 UBE2ZQ9H832 354 aaPredicted RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 MKNK2Q9HBH9 465 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 SLC38A10Q9HBR0 1119 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 ZNF287Q9HBT7 754 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 RAVER2Q9HCJ3 691 aaKnown RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 ARPP21Q9UBL0 812 aaPredicted RBP7.88□□□□□ -1.15
GPHN-206ENST00000553936 CTNNA3Q9UI47 895 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 SYNPO2Q9UMS6 1093 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 NOD1Q9Y239 953 aa7.88□□□□□ -1.15
GPHN-206ENST00000553936 GRIN2DO15399 1336 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 ZNF316A6NFI3 1004 aaPredicted RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 EPOPA6NHQ4 379 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 BCAR3O75815 825 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 PARNO95453 639 aaKnown RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 NDUFB10O96000 172 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 IQCF3P0C7M6 154 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 SMPD1P17405 629 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 PSMC6P62333 389 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 TKFCQ3LXA3 575 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 FAM47CQ5HY64 1035 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 KIAA1211Q6ZU35 1233 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 RPAP2Q8IXW5 612 aaPredicted RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 FAM133AQ8N9E0 248 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.87□□□□□ -1.15
GPHN-206ENST00000553936 MFSD14AQ96MC6 490 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 FBXL18Q96ME1 805 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 DNAJC2Q99543 621 aaKnown RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 MPHOSPH6Q99547 160 aaKnown RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 NUP88Q99567 741 aaPredicted RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 PRRX2Q99811 253 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 UPF3BQ9BZI7 483 aaKnown RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 KATNBL1Q9H079 304 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 HOMER2Q9NSB8 354 aa7.87□□□□□ -1.15
GPHN-206ENST00000553936 TRMT13Q9NUP7 481 aaKnown RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 MYO5AQ9Y4I1 1855 aaKnown RBP7.87□□□□□ -1.15
GPHN-206ENST00000553936 MYH8P13535 1937 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 ASTN1O14525 1302 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 NCOR1O75376 2440 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.86□□□□□ -1.15
GPHN-206ENST00000553936 GOLIM4O00461 696 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 KPNA6O60684 536 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 LPXNO60711 386 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 EFCAB14O75071 495 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 MBD4O95243 580 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 CYP2C9P11712 490 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 KCNA5P22460 613 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 STAT2P52630 851 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 FOXK2Q01167 660 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 CNTN2Q02246 1040 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 PTPN11Q06124 597 aaPredicted RBP7.86□□□□□ -1.15
GPHN-206ENST00000553936 IKQ13123 557 aaPredicted RBP7.86□□□□□ -1.15
GPHN-206ENST00000553936 PTPROQ16827 1216 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 PTCRAQ6ISU1 281 aaPredicted RBP7.86□□□□□ -1.15
GPHN-206ENST00000553936 ZSCAN25Q6NSZ9 544 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 NFRKBQ6P4R8 1299 aa7.86□□□□□ -1.15
GPHN-206ENST00000553936 CLASRPQ8N2M8 674 aaKnown RBP7.86□□□□□ -1.15
GPHN-206ENST00000553936 GDPD5Q8WTR4 605 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms