RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SLC4A3P48751 1232 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 SGMS1Q86VZ5 419 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 GUCD1Q96NT3 240 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 MAD2L2Q9UI95 211 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 CCPG1Q9ULG6 757 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
CDK4-208ENST00000551706 KLRF2D3W0D1 207 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
CDK4-208ENST00000551706 FAM109BQ6ICB4 259 aaPredicted RBP20.17■□□□□ 0.82
CDK4-208ENST00000551706 SYNE3Q6ZMZ3 975 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
CDK4-208ENST00000551706 AGBL1Q96MI9 1066 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 UBA5Q9GZZ9 404 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 ACAD9Q9H845 621 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
CDK4-208ENST00000551706 SLC12A7Q9Y666 1083 aa20.17■□□□□ 0.82
CDK4-208ENST00000551706 ZNF236Q9UL36 1845 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 POTEB2H3BUK9 544 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 DHX16O60231 1041 aaKnown RBP20.16■□□□□ 0.82
CDK4-208ENST00000551706 ALAS1P13196 640 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 SNAP25P60880 206 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 FGD1P98174 961 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 ADGRF4Q8IZF3 695 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 NUP133Q8WUM0 1156 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 TRERF1Q96PN7 1200 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 HMX1Q9NP08 348 aaPredicted RBP20.16■□□□□ 0.82
CDK4-208ENST00000551706 HOMER2Q9NSB8 354 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 RNF146Q9NTX7 359 aa20.16■□□□□ 0.82
CDK4-208ENST00000551706 DOCK3Q8IZD9 2030 aa20.15■□□□□ 0.82
CDK4-208ENST00000551706 GNAQP50148 359 aa20.15■□□□□ 0.82
CDK4-208ENST00000551706 ANKRD35Q8N283 1001 aa20.15■□□□□ 0.82
CDK4-208ENST00000551706 TRIB2Q92519 343 aa20.15■□□□□ 0.82
CDK4-208ENST00000551706 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
CDK4-208ENST00000551706 CPVLQ9H3G5 476 aa20.15■□□□□ 0.82
CDK4-208ENST00000551706 DIS3Q9Y2L1 958 aaKnown RBP20.15■□□□□ 0.82
CDK4-208ENST00000551706 LAMA2P24043 3122 aaKnown RBP20.15■□□□□ 0.82
CDK4-208ENST00000551706 PLXNB2O15031 1838 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 COBLO75128 1261 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.81
CDK4-208ENST00000551706 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 ANAPC15P60006 121 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 CDC37Q16543 378 aaPredicted RBP20.14■□□□□ 0.81
CDK4-208ENST00000551706 MFSD14CQ5VZR4 134 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 OLFML2BQ68BL8 750 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 FBXL16Q8N461 479 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 NPLOC4Q8TAT6 608 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 TM6SF1Q9BZW5 370 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 JMJD4Q9H9V9 463 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 EYSQ5T1H1 3165 aa20.14■□□□□ 0.81
CDK4-208ENST00000551706 PFASO15067 1338 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 CCL14Q16627 93 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 TCEANC2Q96MN5 208 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 MYL10Q9BUA6 226 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 RIOX1Q9H6W3 641 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 ZSWIM6Q9HCJ5 1215 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 VAT1LQ9HCJ6 419 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 OGDHLQ9ULD0 1010 aa20.13■□□□□ 0.81
CDK4-208ENST00000551706 DNAJC25-GNG10A0A024R161 153 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 SMARCA1P28370 1054 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 RCAN1P53805 252 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 TRAF1Q13077 416 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 ZNF792Q3KQV3 632 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 MAP3K21Q5TCX8 1036 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 RUFY3Q7L099 469 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 MTMR8Q96EF0 704 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 MAML3Q96JK9 1138 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 CYP46A1Q9Y6A2 500 aa20.12■□□□□ 0.81
CDK4-208ENST00000551706 PGK2P07205 417 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 PRKAR2AP13861 404 aaKnown RBP20.11■□□□□ 0.81
CDK4-208ENST00000551706 CPA1P15085 419 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 MDM2Q00987 491 aaPredicted RBP20.11■□□□□ 0.81
CDK4-208ENST00000551706 TRIM32Q13049 653 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 QRICH1Q2TAL8 776 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 C8orf34Q49A92 452 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 Q6ZUG5 572 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 MICU3Q86XE3 530 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 FBXO11Q86XK2 927 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
CDK4-208ENST00000551706 FANCBQ8NB91 859 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 SPZ1Q9BXG8 430 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 MAF1Q9H063 256 aa20.11■□□□□ 0.81
CDK4-208ENST00000551706 A1CFQ9NQ94 594 aaKnown RBP20.11■□□□□ 0.81
CDK4-208ENST00000551706 ABCB11O95342 1321 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 ZBTB5O15062 677 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 ZBTB43O43298 467 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 MUM1L1Q5H9M0 696 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 ZNF467Q7Z7K2 595 aaPredicted RBP20.1■□□□□ 0.81
CDK4-208ENST00000551706 AMNQ9BXJ7 453 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 AGXT2Q9BYV1 514 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 RBM28Q9NW13 759 aaKnown RBP20.1■□□□□ 0.81
CDK4-208ENST00000551706 FLRT1Q9NZU1 646 aa20.1■□□□□ 0.81
CDK4-208ENST00000551706 KLF18A0A0U1RQI7 1052 aa20.09■□□□□ 0.81
CDK4-208ENST00000551706 IGHA2P01877 340 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms