RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 PCDHAC2Q9Y5I4 1007 aa9.84□□□□□ -0.83
LETMD1-225ENST00000550715 DDX60Q8IY21 1712 aaKnown RBP9.84□□□□□ -0.83
LETMD1-225ENST00000550715 SH3TC1Q8TE82 1336 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 KIF4AO95239 1232 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 FOSL2P15408 326 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 ELNP15502 786 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 NRLP54845 237 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 GPLD1P80108 840 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 SF3B3Q15393 1217 aaKnown RBP9.83□□□□□ -0.84
LETMD1-225ENST00000550715 SUPT20HL1Q3ZLR7 823 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.83□□□□□ -0.84
LETMD1-225ENST00000550715 FRMD6Q96NE9 622 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 ZKSCAN3Q9BRR0 538 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 KLF15Q9UIH9 416 aa9.83□□□□□ -0.84
LETMD1-225ENST00000550715 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
LETMD1-225ENST00000550715 ADCY3O60266 1144 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 CTSHP09668 335 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 HOXD8P13378 290 aaPredicted RBP9.82□□□□□ -0.84
LETMD1-225ENST00000550715 TCF3P15923 654 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 LRP10Q7Z4F1 713 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 KIAA0825Q8IV33 1275 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 TMEM87AQ8NBN3 555 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 LRFN3Q9BTN0 628 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 PAK6Q9NQU5 681 aaPredicted RBP9.82□□□□□ -0.84
LETMD1-225ENST00000550715 IGSF5Q9NSI5 407 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 COL2A1P02458 1487 aaPredicted RBP9.82□□□□□ -0.84
LETMD1-225ENST00000550715 PSME4Q14997 1843 aa9.82□□□□□ -0.84
LETMD1-225ENST00000550715 NEURL1BA8MQ27 555 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 U2SURPO15042 1029 aaKnown RBP9.81□□□□□ -0.84
LETMD1-225ENST00000550715 SIN3BO75182 1162 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 WDHD1O75717 1129 aaPredicted RBP9.81□□□□□ -0.84
LETMD1-225ENST00000550715 USP17L7P0C7H9 530 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 VSIG8P0DPA2 414 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 CPB1P15086 417 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 EIF2AK2P19525 551 aaKnown RBP9.81□□□□□ -0.84
LETMD1-225ENST00000550715 ATP11AP98196 1134 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
LETMD1-225ENST00000550715 NPAS3Q8IXF0 933 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 FAM89AQ96GI7 184 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 HHIPQ96QV1 700 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 OSMRQ99650 979 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 C1QTNF1Q9BXJ1 281 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 LIN7BQ9HAP6 207 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 SEC31BQ9NQW1 1179 aa9.81□□□□□ -0.84
LETMD1-225ENST00000550715 CLRN2A0PK11 232 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 ANXA1P04083 346 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 CAPN2P17655 700 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 STRIP1Q5VSL9 837 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 KIAA0319Q5VV43 1072 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 CEP120Q8N960 986 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 CRELD1Q96HD1 420 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 UHRF1Q96T88 793 aaPredicted RBP9.8□□□□□ -0.84
LETMD1-225ENST00000550715 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 AOX1Q06278 1338 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 FAM205AQ6ZU69 1335 aa9.8□□□□□ -0.84
LETMD1-225ENST00000550715 ARAFP10398 606 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 CETPP11597 493 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 ADH6P28332 368 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 ADH7P40394 386 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 VGLL4Q14135 290 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 RASA3Q14644 834 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 DLGAP5Q15398 846 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 PROSER3Q2NL68 480 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 FCHSD1Q86WN1 690 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 GLIS3Q8NEA6 775 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 ASB2Q96Q27 587 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 RASSF4Q9H2L5 321 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 DZANK1Q9NVP4 752 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 PPP2R3BQ9Y5P8 575 aa9.79□□□□□ -0.84
LETMD1-225ENST00000550715 METTL12A8MUP2 240 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 GIPC1O14908 333 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 GHRHP01286 108 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 ZEB1P37275 1124 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-225ENST00000550715 MAP2K3P46734 347 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 FLT3LGP49771 235 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 FCGRTP55899 365 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 EIF4A1P60842 406 aaKnown RBP9.78□□□□□ -0.84
LETMD1-225ENST00000550715 KRT76Q01546 638 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 MEI1Q5TIA1 1274 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 FAM35AQ86V20 835 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 RTF1Q92541 710 aaKnown RBP9.78□□□□□ -0.84
LETMD1-225ENST00000550715 TNFRSF25Q93038 417 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 PRMT6Q96LA8 375 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-225ENST00000550715 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-225ENST00000550715 EPHX3Q9H6B9 360 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 C11orf49Q9H6J7 331 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 AVENQ9NQS1 362 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-225ENST00000550715 FAM8A1Q9UBU6 413 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 ZNF804BA4D1E1 1349 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 ADGRA2Q96PE1 1338 aa9.78□□□□□ -0.84
LETMD1-225ENST00000550715 PRKAR2BP31323 418 aa9.77□□□□□ -0.85
LETMD1-225ENST00000550715 MRE11P49959 708 aa9.77□□□□□ -0.85
LETMD1-225ENST00000550715 MMP14P50281 582 aa9.77□□□□□ -0.85
LETMD1-225ENST00000550715 AIMP1Q12904 312 aaKnown RBP9.77□□□□□ -0.85
LETMD1-225ENST00000550715 SHHQ15465 462 aa9.77□□□□□ -0.85
LETMD1-225ENST00000550715 TTLL5Q6EMB2 1281 aa9.77□□□□□ -0.85
LETMD1-225ENST00000550715 TXNRD3Q86VQ6 643 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms