RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 IFIT1BQ5T764 474 aaKnown RBP13.82□□□□□ -0.2
LETMD1-221ENST00000550100 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 ARMCX2Q7L311 632 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 UBAC1Q9BSL1 405 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 PRO3102Q9H379 93 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 JMJD4Q9H9V9 463 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 VAT1LQ9HCJ6 419 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 NRBP1Q9UHY1 535 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
LETMD1-221ENST00000550100 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-221ENST00000550100 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 DNM1LO00429 736 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 PPP1R11O60927 126 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 SYN1P17600 705 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 NT5C2P49902 561 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 CCDC144BQ3MJ40 725 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 FERMT2Q96AC1 680 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 PDGFCQ9NRA1 345 aa13.81□□□□□ -0.2
LETMD1-221ENST00000550100 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-221ENST00000550100 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
LETMD1-221ENST00000550100 CTAGE5O15320 804 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 ADAMTS4O75173 837 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
LETMD1-221ENST00000550100 CDC37Q16543 378 aaPredicted RBP13.8□□□□□ -0.2
LETMD1-221ENST00000550100 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 USH1GQ495M9 461 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 HABP4Q5JVS0 413 aaKnown RBP13.8□□□□□ -0.2
LETMD1-221ENST00000550100 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 NCOA7Q8NI08 942 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 XPNPEP3Q9NQH7 507 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
LETMD1-221ENST00000550100 CNPY2Q9Y2B0 182 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 OPLAHO14841 1288 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 CYTH3O43739 400 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 AKR1A1P14550 325 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 TROAPQ12815 778 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 TRDNQ13061 729 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 ASPRV1Q53RT3 343 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 CCSAPQ6IQ19 270 aaPredicted RBP13.8□□□□□ -0.2
LETMD1-221ENST00000550100 TAPT1Q6NXT6 567 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 KIAA1211Q6ZU35 1233 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 ARRDC4Q8NCT1 418 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 KLHDC9Q8NEP7 349 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 MTMR8Q96EF0 704 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 NR2E3Q9Y5X4 410 aa13.8□□□□□ -0.2
LETMD1-221ENST00000550100 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 SYNRGQ9UMZ2 1314 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 KLRF2D3W0D1 207 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 RARBP10826 455 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 CALML3P27482 149 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
LETMD1-221ENST00000550100 GRM4Q14833 912 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 SLC39A5Q6ZMH5 540 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 MYL10Q9BUA6 226 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 LRRC2Q9BYS8 371 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 ABHD16BQ9H3Z7 469 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 FAM184BQ9ULE4 1060 aa13.79□□□□□ -0.2
LETMD1-221ENST00000550100 LAMA2P24043 3122 aaKnown RBP13.78□□□□□ -0.2
LETMD1-221ENST00000550100 LRRC37A2A6NM11 1700 aa13.78□□□□□ -0.2
LETMD1-221ENST00000550100 PTPDC1A2A3K4 754 aa13.78□□□□□ -0.2
LETMD1-221ENST00000550100 PRC1O43663 620 aa13.78□□□□□ -0.2
LETMD1-221ENST00000550100 WTAPQ15007 396 aa13.78□□□□□ -0.2
LETMD1-221ENST00000550100 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
LETMD1-221ENST00000550100 RALYLQ86SE5 291 aaKnown RBP13.78□□□□□ -0.2
LETMD1-221ENST00000550100 FBXO16Q8IX29 292 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-221ENST00000550100 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
LETMD1-221ENST00000550100 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
LETMD1-221ENST00000550100 CDC45O75419 566 aa13.77□□□□□ -0.21
LETMD1-221ENST00000550100 SMPD1P17405 629 aa13.77□□□□□ -0.21
LETMD1-221ENST00000550100 ALDH5A1P51649 535 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-221ENST00000550100 RTP1P59025 263 aa13.77□□□□□ -0.21
LETMD1-221ENST00000550100 KCNA10Q16322 511 aa13.77□□□□□ -0.21
LETMD1-221ENST00000550100 ADCK5Q3MIX3 580 aa13.77□□□□□ -0.21
LETMD1-221ENST00000550100 UPF3AQ9H1J1 476 aaKnown RBP13.77□□□□□ -0.21
LETMD1-221ENST00000550100 GNEQ9Y223 722 aaKnown RBP13.77□□□□□ -0.21
LETMD1-221ENST00000550100 MYH6P13533 1939 aa13.77□□□□□ -0.21
LETMD1-221ENST00000550100 ASB14A6NK59 587 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 SH2B2O14492 632 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-221ENST00000550100 BEX3Q00994 111 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 SNX17Q15036 470 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 TRIM60Q495X7 471 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 SH3RF1Q7Z6J0 888 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 FBXO11Q86XK2 927 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms