RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SOWAHBA6NEL2 793 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 B4DLN1 442 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 CLTBP09497 229 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 SNHG28P0DPA3 235 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 MRPL12P52815 198 aaKnown RBP10.98□□□□□ -0.65
YBX3-218ENST00000546298 GJA9P57773 515 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 TNFAIP2Q03169 654 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 PWP2Q15269 919 aaKnown RBP10.98□□□□□ -0.65
YBX3-218ENST00000546298 KCNA10Q16322 511 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 TTC22Q5TAA0 569 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 IQSEC1Q6DN90 963 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 ANKS1AQ92625 1134 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 LENG1Q96BZ8 264 aaPredicted RBP10.98□□□□□ -0.65
YBX3-218ENST00000546298 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 AP5M1Q9H0R1 490 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 UPF3AQ9H1J1 476 aaKnown RBP10.98□□□□□ -0.65
YBX3-218ENST00000546298 PDLIM7Q9NR12 457 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 ELP1O95163 1332 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 WDR19Q8NEZ3 1342 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 SYNRGQ9UMZ2 1314 aa10.98□□□□□ -0.65
YBX3-218ENST00000546298 ZEB2O60315 1214 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 PQBP1O60828 265 aaKnown RBP10.97□□□□□ -0.65
YBX3-218ENST00000546298 CABYRO75952 493 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 NKX3-2P78367 333 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 BAATQ14032 418 aaPredicted RBP10.97□□□□□ -0.65
YBX3-218ENST00000546298 CCSAPQ6IQ19 270 aaPredicted RBP10.97□□□□□ -0.65
YBX3-218ENST00000546298 RASGRP2Q7LDG7 609 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 ZSCAN10Q96SZ4 725 aaPredicted RBP10.97□□□□□ -0.65
YBX3-218ENST00000546298 ZKSCAN3Q9BRR0 538 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 UBAC1Q9BSL1 405 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 MAF1Q9H063 256 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 KATNBL1Q9H079 304 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 VTA1Q9NP79 307 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 Q9Y3F1 56 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 NEDD4P46934 1319 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 MROH7Q68CQ1 1323 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 RAD50Q92878 1312 aa10.97□□□□□ -0.65
YBX3-218ENST00000546298 MYH8P13535 1937 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 A0A0U1RQG5 324 aaPredicted RBP10.96□□□□□ -0.65
YBX3-218ENST00000546298 PTPDC1A2A3K4 754 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 TRIM43BA6NCK2 446 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 B4E1Z4 1266 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 KIAA0355O15063 1070 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 ASGR1P07306 291 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 RAG1P15918 1043 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 TRDNQ13061 729 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 ASPRV1Q53RT3 343 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 RNF207Q6ZRF8 634 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 ANKRD33Q7Z3H0 272 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 MORC4Q8TE76 937 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 BADQ92934 168 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.65
YBX3-218ENST00000546298 SEZ6LQ9BYH1 1024 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 TMEM39AQ9NV64 488 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 ZSWIM5Q9P217 1185 aa10.96□□□□□ -0.65
YBX3-218ENST00000546298 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
YBX3-218ENST00000546298 MYADML2A6NDP7 307 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 ARVCFO00192 962 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 NFIBO00712 420 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 TLR3O15455 904 aaKnown RBP10.95□□□□□ -0.66
YBX3-218ENST00000546298 DYNC1LI2O43237 492 aaPredicted RBP10.95□□□□□ -0.66
YBX3-218ENST00000546298 GOLGA8HP0CJ92 632 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 CALML3P27482 149 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 PDE4AP27815 886 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 ALDH5A1P51649 535 aaPredicted RBP10.95□□□□□ -0.66
YBX3-218ENST00000546298 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 EEPD1Q7L9B9 569 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 TLK2Q86UE8 772 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 DEFB123Q8N688 67 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 RGS22Q8NE09 1264 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 UBA5Q9GZZ9 404 aa10.95□□□□□ -0.66
YBX3-218ENST00000546298 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
YBX3-218ENST00000546298 TNKSO95271 1327 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 ADCY6O43306 1168 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 PARP1P09874 1014 aaKnown RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 GSPT1P15170 499 aaKnown RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 SMPD1P17405 629 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 CHMLP26374 656 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 CDK7P50613 346 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 RPS6P62753 249 aaKnown RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 IRX6P78412 446 aaPredicted RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 PDE4DQ08499 809 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 FAAP100Q0VG06 881 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 FSCN1Q16658 493 aaKnown RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 BRDTQ58F21 947 aaPredicted RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 IFIT1BQ5T764 474 aaKnown RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 TAPT1Q6NXT6 567 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 MCF2L2Q86YR7 1114 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 ENAHQ8N8S7 591 aaPredicted RBP10.94□□□□□ -0.66
YBX3-218ENST00000546298 DNERQ8NFT8 737 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 CLEC4DQ8WXI8 215 aa10.94□□□□□ -0.66
YBX3-218ENST00000546298 ABCB11O95342 1321 aa10.93□□□□□ -0.66
YBX3-218ENST00000546298 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.93□□□□□ -0.66
YBX3-218ENST00000546298 ERICH2A1L162 156 aa10.93□□□□□ -0.66
YBX3-218ENST00000546298 NKRFO15226 690 aaKnown RBP eCLIP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms