RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 NT5C2P49902 561 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 GABPAQ06546 454 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 PTGDRQ13258 359 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 HOMER1Q86YM7 354 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 STAG2Q8N3U4 1231 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
CHFR-223ENST00000544268 FAM198AQ9UFP1 575 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 A0A0U1RQJ8 604 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 KCNJ6P48051 423 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 CXCL9Q07325 125 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 NT5DC1Q5TFE4 455 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 ATRIPQ8WXE1 791 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 SRRTQ9BXP5 876 aaKnown RBP16.9■□□□□ 0.3
CHFR-223ENST00000544268 DNAI1Q9UI46 699 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 RRP15Q9Y3B9 282 aaKnown RBP16.9■□□□□ 0.3
CHFR-223ENST00000544268 DDAH1O94760 285 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 SLURP2P0DP57 97 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 MCM7P33993 719 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 SMC1AQ14683 1233 aaKnown RBP16.9■□□□□ 0.3
CHFR-223ENST00000544268 MTF1Q14872 753 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 TOGARAM2Q6ZUX3 1019 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 DGKHQ86XP1 1220 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 EXOC4Q96A65 974 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 DESI2Q9BSY9 194 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 CPVLQ9H3G5 476 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
CHFR-223ENST00000544268 TCP11L1Q9NUJ3 509 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
CHFR-223ENST00000544268 GUCY2CP25092 1073 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 GYS2P54840 703 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 RASSF7Q02833 373 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 TRIM65Q6PJ69 517 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 EGFL6Q8IUX8 553 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
CHFR-223ENST00000544268 JDP2Q8WYK2 163 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 MTRQ99707 1265 aa16.89■□□□□ 0.29
CHFR-223ENST00000544268 CALM1P0DP23 149 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 CALM2P0DP24 149 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 CALM3P0DP25 149 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 SLC35G1Q2M3R5 365 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 TTC38Q5R3I4 469 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 TC2NQ8N9U0 490 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 ANKS1AQ92625 1134 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 KAT14Q9H8E8 782 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 DDTLA6NHG4 134 aaPredicted RBP16.88■□□□□ 0.29
CHFR-223ENST00000544268 EFCAB8A8MWE9 144 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 SH3BP5LQ7L8J4 393 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 PNMA1Q8ND90 353 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 SPATA20Q8TB22 786 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 MYCBPQ99417 103 aaPredicted RBP16.88■□□□□ 0.29
CHFR-223ENST00000544268 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 MAPK8IP1Q9UQF2 711 aa16.88■□□□□ 0.29
CHFR-223ENST00000544268 PHLPP2Q6ZVD8 1323 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 PRELPP51888 382 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 NLRP5P59047 1200 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 DHX8Q14562 1220 aaKnown RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 CCDC178Q5BJE1 867 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 EPC1Q9H2F5 836 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 SPON1Q9HCB6 807 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 CBFA2T2O43439 604 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 TADA3O75528 432 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 SASH3O75995 380 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 SEC31AO94979 1220 aaKnown RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 SHMT1P34896 483 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 ETF1P62495 437 aaKnown RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 TBX2Q13207 712 aaPredicted RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 MNS1Q8NEH6 495 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 CTCFLQ8NI51 663 aaPredicted RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 ENOX1Q8TC92 643 aaKnown RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 IRX2Q9BZI1 471 aaPredicted RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
CHFR-223ENST00000544268 HDAC9Q9UKV0 1011 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 CEP131Q9UPN4 1083 aa16.87■□□□□ 0.29
CHFR-223ENST00000544268 MYH8P13535 1937 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 PP2D1A8MPX8 630 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 AKR1B1P15121 316 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 XBP1P17861 261 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 ACTN2P35609 894 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 CIAPIN1Q6FI81 312 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 ZSCAN29Q8IWY8 852 aaPredicted RBP16.86■□□□□ 0.29
CHFR-223ENST00000544268 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms