RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CHD9Q3L8U1 2897 aa3.09□□□□□ -1.92
TRAV1-1-201ENST00000542354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP17L5A8MUK1 530 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 TGFBR3LH3BV60 316 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 STARD3NLO95772 234 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 STAU1O95793 577 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 HMGCRP04035 888 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 VIL1P09327 827 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 FSTP19883 344 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 AFF1P51825 1210 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 EPHB4P54760 987 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 FPGSQ05932 587 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZP2Q05996 745 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 NCOA4Q13772 614 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 RTN1Q16799 776 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 UVSSAQ2YD98 709 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 TSGA10IPQ3SY00 556 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 SUPT20HL1Q3ZLR7 823 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 NME9Q86XW9 330 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 APOBEC3FQ8IUX4 373 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 PLEKHM2Q8IWE5 1019 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 DMRTC2Q8IXT2 367 aaPredicted RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZGPATQ8N5A5 531 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 AGBL3Q8NEM8 1001 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 TPCN2Q8NHX9 752 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 NUDT8Q8WV74 236 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 VTI1AQ96AJ9 217 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 RUNDC1Q96C34 613 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 FMNL2Q96PY5 1086 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 RTKNQ9BST9 563 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 LSM14BQ9BX40 385 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 NKX2-4Q9H2Z4 354 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 UBE2ZQ9H832 354 aaPredicted RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 GDPD2Q9HCC8 539 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 FZD1Q9UP38 647 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 DSPP15924 2871 aaKnown RBP3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 NBEAQ8NFP9 2946 aa3.08□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZSWIM8A7E2V4 1837 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 DMDP11532 3685 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 PRR5-ARHGAP8B1AHC4 643 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 BTBD19C9JJ37 291 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 TNPO2O14787 897 aaKnown RBP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 DHX15O43143 795 aaKnown RBP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 GHRHP01286 108 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 SLC5A1P13866 664 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 RAG1P15918 1043 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 KCNA5P22460 613 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 RBM25P49756 843 aaKnown RBP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 EPHA4P54764 986 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ARHGAP8P85298 464 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 SHC2P98077 582 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 SRSF1Q07955 248 aaKnown RBP eCLIP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 PPM1JQ5JR12 505 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 CCDC102BQ68D86 513 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 CLEC4GQ6UXB4 293 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 C8orf86Q6ZUL3 223 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 RAB44Q7Z6P3 723 aaPredicted RBP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ADHFE1Q8IWW8 467 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ALDH16A1Q8IZ83 802 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 TMEM130Q8N3G9 435 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 GLIS3Q8NEA6 775 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZDHHC1Q8WTX9 485 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 RUBCNQ92622 972 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 COA7Q96BR5 231 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 POP1Q99575 1024 aaKnown RBP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 HAUS7Q99871 368 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 SSBP4Q9BWG4 385 aaPredicted RBP3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 DBNDD1Q9H9R9 158 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ELP3Q9H9T3 547 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 RNF114Q9Y508 228 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 TACC3Q9Y6A5 838 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZNF536O15090 1300 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 ITPR1Q14643 2758 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 A0A0G2JMZ2 1700 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 PLXNA1Q9UIW2 1896 aa3.07□□□□□ -1.92
TRAV1-1-201ENST00000542354 IGSF10Q6WRI0 2623 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 TENM4Q6N022 2769 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 CHD7Q9P2D1 2997 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 TRIM43BA6NCK2 446 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 TMEM8BA6NDV4 472 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 SRRM3A6NNA2 597 aaPredicted RBP3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 RFXAPO00287 272 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP2O75604 605 aaPredicted RBP3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 BBOX1O75936 387 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 PSAPP07602 524 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 RGPD2P0DJD1 1756 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 NFKB1P19838 968 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 ARSDP51689 593 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 NRLP54845 237 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 GPLD1P80108 840 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZXDAP98168 799 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 SIGLEC14Q08ET2 396 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 NCAPD2Q15021 1401 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 SHISA2Q6UWI4 295 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 OGFOD1Q8N543 542 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 TRIM43Q96BQ3 446 aaPredicted RBP3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZNF496Q96IT1 587 aaPredicted RBP3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 MYBBP1AQ9BQG0 1328 aaKnown RBP3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 DEFB129Q9H1M3 183 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms