RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 CYP2C18P33260 490 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 SLC1A4P43007 532 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 IQSEC1Q6DN90 963 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 CXCL17Q6UXB2 119 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 TRERF1Q96PN7 1200 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 SEC62Q99442 399 aaKnown RBP15.55■□□□□ 0.08
SCARB1-207ENST00000541661 Q9Y3F1 56 aa15.55■□□□□ 0.08
SCARB1-207ENST00000541661 GRIN2DO15399 1336 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 FGBP02675 491 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 PPARAQ07869 468 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 ITGA7Q13683 1181 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 RAB30Q15771 203 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 FSCN1Q16658 493 aaKnown RBP15.54■□□□□ 0.08
SCARB1-207ENST00000541661 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
SCARB1-207ENST00000541661 RCSD1Q6JBY9 416 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 TAPT1Q6NXT6 567 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 TLK2Q86UE8 772 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 ATXN2LQ8WWM7 1075 aaKnown RBP15.54■□□□□ 0.08
SCARB1-207ENST00000541661 NAPBQ9H115 298 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 MTIF3Q9H2K0 278 aaKnown RBP15.54■□□□□ 0.08
SCARB1-207ENST00000541661 HIPK3Q9H422 1215 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 PRDM12Q9H4Q4 367 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 MSRAQ9UJ68 235 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 LCTP09848 1927 aa15.54■□□□□ 0.08
SCARB1-207ENST00000541661 ZEB2O60315 1214 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 SMPD1P17405 629 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 MCCP23508 829 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 ZMYM1Q5SVZ6 1142 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 NOL8Q76FK4 1167 aaKnown RBP15.53■□□□□ 0.08
SCARB1-207ENST00000541661 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 MORC4Q8TE76 937 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 AP5M1Q9H0R1 490 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 IL17RBQ9NRM6 502 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 CYP39A1Q9NYL5 469 aa15.53■□□□□ 0.08
SCARB1-207ENST00000541661 CXXC1Q9P0U4 656 aaPredicted RBP15.53■□□□□ 0.08
SCARB1-207ENST00000541661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■■■□ 24.4
SCARB1-207ENST00000541661 TNFRSF10AO00220 468 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 ERC2O15083 957 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 DYNC1LI2O43237 492 aaPredicted RBP15.52■□□□□ 0.08
SCARB1-207ENST00000541661 ALAS1P13196 640 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 NOVP48745 357 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.08
SCARB1-207ENST00000541661 ADGRE1Q14246 886 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 KCTD1Q719H9 257 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 NOC4LQ9BVI4 516 aaKnown RBP15.52■□□□□ 0.08
SCARB1-207ENST00000541661 PDGFCQ9NRA1 345 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 PRR12Q9ULL5 1215 aa15.52■□□□□ 0.08
SCARB1-207ENST00000541661 MYO9BQ13459 2157 aa15.52■□□□□ 0.07
SCARB1-207ENST00000541661 UMODL1Q5DID0 1318 aa15.51■□□□□ 0.07
SCARB1-207ENST00000541661 MUM1L1Q5H9M0 696 aa15.51■□□□□ 0.07
SCARB1-207ENST00000541661 TRPV6Q9H1D0 765 aa15.51■□□□□ 0.07
SCARB1-207ENST00000541661 VTA1Q9NP79 307 aa15.51■□□□□ 0.07
SCARB1-207ENST00000541661 CHD7Q9P2D1 2997 aa15.51■□□□□ 0.07
SCARB1-207ENST00000541661 ISY1Q9ULR0 285 aaKnown RBP15.51■□□□□ 0.07
SCARB1-207ENST00000541661 STX8Q9UNK0 236 aa15.51■□□□□ 0.07
SCARB1-207ENST00000541661 LOC102724159A0A0B4J2E5 919 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 TSPY2A6NKD2 308 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 FOXP2O15409 715 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 B4GALT4O60513 344 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 ICAM1P05362 532 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 PTGS1P23219 599 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 SNAP25P60880 206 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 PWP2Q15269 919 aaKnown RBP15.5■□□□□ 0.07
SCARB1-207ENST00000541661 TMEM63BQ5T3F8 832 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 OTOP2Q7RTS6 562 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 RPUSD2Q8IZ73 545 aaKnown RBP15.5■□□□□ 0.07
SCARB1-207ENST00000541661 PPM1EQ8WY54 764 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 ASB2Q96Q27 587 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 FSD1Q9BTV5 496 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 WNT8AQ9H1J5 351 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 SLC28A3Q9HAS3 691 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 THEGQ9P2T0 379 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 ANAPC4Q9UJX5 808 aa15.5■□□□□ 0.07
SCARB1-207ENST00000541661 YBX2Q9Y2T7 364 aaKnown RBP15.5■□□□□ 0.07
SCARB1-207ENST00000541661 DDX49Q9Y6V7 483 aaKnown RBP15.5■□□□□ 0.07
SCARB1-207ENST00000541661 FGRP09769 529 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 CCL23P55773 120 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 DUSP28Q4G0W2 176 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 KIAA1211Q6ZU35 1233 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 EEPD1Q7L9B9 569 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 FBXO16Q8IX29 292 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-207ENST00000541661 ALDH8A1Q9H2A2 487 aaPredicted RBP15.49■□□□□ 0.07
SCARB1-207ENST00000541661 RANBP17Q9H2T7 1088 aaKnown RBP15.49■□□□□ 0.07
SCARB1-207ENST00000541661 INCENPQ9NQS7 918 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 CCPG1Q9ULG6 757 aa15.49■□□□□ 0.07
SCARB1-207ENST00000541661 RBM47A0AV96 593 aaKnown RBP15.48■□□□□ 0.07
SCARB1-207ENST00000541661 NMT2O60551 498 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 PSMC6P62333 389 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 MRPS5P82675 430 aaKnown RBP15.48■□□□□ 0.07
SCARB1-207ENST00000541661 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 NSMFQ6X4W1 530 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 DCAF4Q8WV16 495 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 CHMP4CQ96CF2 233 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 POLR3EQ9NVU0 708 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 ADD3Q9UEY8 706 aaKnown RBP15.48■□□□□ 0.07
SCARB1-207ENST00000541661 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms