RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 TACO1Q9BSH4 297 aaKnown RBP14.36□□□□□ -0.11
DNMT1-203ENST00000540357 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 TMEM131LA2VDJ0 1609 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 CHUKO15111 745 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 MCAMP43121 646 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 KIF11P52732 1056 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 FOXO4P98177 505 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 PPP1R7Q15435 360 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 C6orf163Q5TEZ5 329 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 LRRN4CLQ8ND94 238 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 HEG1Q9ULI3 1381 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 CEP170BQ9Y4F5 1589 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-203ENST00000540357 TECPR2O15040 1411 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 CUL4BQ13620 913 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 INF2Q27J81 1249 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 INTS8Q75QN2 995 aaKnown RBP14.36□□□□□ -0.11
DNMT1-203ENST00000540357 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 RIPOR2Q9Y4F9 1068 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 NPHP4O75161 1426 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-203ENST00000540357 ERBB3P21860 1342 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 SPATA31D1Q6ZQQ2 1576 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 EIF4A3P38919 411 aaKnown RBP14.36□□□□□ -0.11
DNMT1-203ENST00000540357 WDR93Q6P2C0 686 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
DNMT1-203ENST00000540357 PSMD14O00487 310 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 ZPR1O75312 459 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 ATP1A1P05023 1023 aaKnown RBP14.35□□□□□ -0.11
DNMT1-203ENST00000540357 CYP27A1Q02318 531 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 PAIP2Q9BPZ3 127 aaKnown RBP14.35□□□□□ -0.11
DNMT1-203ENST00000540357 TRIM31Q9BZY9 425 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 AMFRQ9UKV5 643 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 ODF2LQ9ULJ1 636 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 RGS16O15492 202 aaPredicted RBP14.35□□□□□ -0.11
DNMT1-203ENST00000540357 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
DNMT1-203ENST00000540357 EHHADHQ08426 723 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 DNAJC10Q8IXB1 793 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 LMNTD2Q8IXW0 634 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 ANKRD13CQ8N6S4 541 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 NCAPGQ9BPX3 1015 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 CNOT10Q9H9A5 744 aaKnown RBP14.35□□□□□ -0.11
DNMT1-203ENST00000540357 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 PLCG2P16885 1265 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 SLC7A5Q01650 507 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 PDCLQ13371 301 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 CCDC25Q86WR0 208 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 DISC1Q9NRI5 854 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 CAPN11Q9UMQ6 739 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 HPS5Q9UPZ3 1129 aa14.35□□□□□ -0.11
DNMT1-203ENST00000540357 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.35□□□□□ -0.11
DNMT1-203ENST00000540357 TTC26A0AVF1 554 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 FAM47AQ5JRC9 791 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 HS2ST1Q7LGA3 356 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 GPIHBP1Q8IV16 184 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 FBXL16Q8N461 479 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 CCDC197Q8NCU1 140 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 SLC39A2Q9NP94 309 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 USP17L21D6R901 530 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 TNFAIP3P21580 790 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 PNKPQ96T60 521 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
DNMT1-203ENST00000540357 NEBLO76041 1014 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 ANTXR2P58335 489 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 CUL1Q13616 776 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 CEP128Q6ZU80 1094 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 TMEM110-MUSTN1A8MSY1 372 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 CHGBP05060 677 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 LDHBP07195 334 aaKnown RBP14.34□□□□□ -0.11
DNMT1-203ENST00000540357 CXCR5P32302 372 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
DNMT1-203ENST00000540357 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
DNMT1-203ENST00000540357 PTPAQ15257 358 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 HAUS3Q68CZ6 603 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 REXO1Q8N1G1 1221 aaKnown RBP14.34□□□□□ -0.11
DNMT1-203ENST00000540357 PBKQ96KB5 322 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 GDAQ9Y2T3 454 aa14.34□□□□□ -0.11
DNMT1-203ENST00000540357 CCDC169A6NNP5 214 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 H3BQF6 201 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 TFAP4Q01664 338 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 CCNI2Q6ZMN8 369 aaPredicted RBP14.33□□□□□ -0.11
DNMT1-203ENST00000540357 NEK8Q86SG6 692 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 RPAINQ86UA6 219 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 GSPT2Q8IYD1 628 aaKnown RBP14.33□□□□□ -0.11
DNMT1-203ENST00000540357 OXER1Q8TDS5 423 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 STK24Q9Y6E0 443 aa14.33□□□□□ -0.11
DNMT1-203ENST00000540357 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.12
DNMT1-203ENST00000540357 EIF3HO15372 352 aaKnown RBP eCLIP14.33□□□□□ -0.128e-7■■■■■ 29.8
DNMT1-203ENST00000540357 N4BP1O75113 896 aaKnown RBP14.33□□□□□ -0.12
DNMT1-203ENST00000540357 CASP1P29466 404 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 TECP42680 631 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 ADCY7P51828 1080 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 HERC4Q5GLZ8 1057 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms