RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ANKRD33Q7Z3H0 272 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
VPS26B-207ENST00000532160 MYLIPQ8WY64 445 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 MKL1Q969V6 931 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 RNPC3Q96LT9 517 aaKnown RBP11.02□□□□□ -0.65
VPS26B-207ENST00000532160 TSEN34Q9BSV6 310 aaKnown RBP11.02□□□□□ -0.65
VPS26B-207ENST00000532160 UPF2Q9HAU5 1272 aaKnown RBP11.02□□□□□ -0.65
VPS26B-207ENST00000532160 STARD7Q9NQZ5 370 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 TMEM39AQ9NV64 488 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 MTMR4Q9NYA4 1195 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 MUC3AQ02505 3323 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 PLIN4Q96Q06 1357 aa11.02□□□□□ -0.65
VPS26B-207ENST00000532160 B4E1Z4 1266 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 E7EWF7 191 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 ZBED4O75132 1171 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 DUSP11O75319 330 aaKnown RBP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 TTLL1O95922 423 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 SLC3A2P08195 630 aaKnown RBP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 HSPA4P34932 840 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 FPGSQ05932 587 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 PDE4BQ07343 736 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 ACVR2BQ13705 512 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 MFSD6Q6ZSS7 791 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 ANKRD35Q8N283 1001 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 GMCL1P1Q8NEA9 526 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 MAFAQ8NHW3 353 aaPredicted RBP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 CHMP4CQ96CF2 233 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 TOX2Q96NM4 488 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 HOMER2Q9NSB8 354 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 FEM1BQ9UK73 627 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 TBX21Q9UL17 535 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS26B-207ENST00000532160 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
VPS26B-207ENST00000532160 LCTP09848 1927 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 MOXD2PA6NHM9 499 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 DCDC2CA8MYV0 355 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 RANBP6O60518 1105 aaKnown RBP11□□□□□ -0.65
VPS26B-207ENST00000532160 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
VPS26B-207ENST00000532160 CST5P28325 142 aaPredicted RBP11□□□□□ -0.65
VPS26B-207ENST00000532160 CNTN2Q02246 1040 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 CCDC144BQ3MJ40 725 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 SLFN13Q68D06 897 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 ARMCX2Q7L311 632 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 CHST3Q7LGC8 479 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 CCDC144CPQ8IYA2 1237 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 NEDD1Q8NHV4 660 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 NUP133Q8WUM0 1156 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 STAG1Q8WVM7 1258 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 ZKSCAN3Q9BRR0 538 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 KATNBL1Q9H079 304 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 UPF3AQ9H1J1 476 aaKnown RBP11□□□□□ -0.65
VPS26B-207ENST00000532160 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
VPS26B-207ENST00000532160 SNX14Q9Y5W7 946 aa11□□□□□ -0.65
VPS26B-207ENST00000532160 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.99□□□□□ -0.65
VPS26B-207ENST00000532160 TMEM232C9JQI7 657 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 CTAGE5O15320 804 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 NMT2O60551 498 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 KDM4AO75164 1064 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 TIMP1P01033 207 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 ASGR1P07306 291 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 TSPY3P0CV98 308 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 TSPY8P0CW00 308 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 BMP3P12645 472 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 CPA1P15085 419 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 FOSL2P15408 326 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 PTGS1P23219 599 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 OAZ1P54368 228 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 TFAP4Q01664 338 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 BECN1Q14457 450 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 CHST13Q8NET6 341 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 ABHD16BQ9H3Z7 469 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 RNF41Q9H4P4 317 aaPredicted RBP10.99□□□□□ -0.65
VPS26B-207ENST00000532160 ZNF287Q9HBT7 754 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
VPS26B-207ENST00000532160 SYNPO2Q9UMS6 1093 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
VPS26B-207ENST00000532160 LAMA4Q16363 1823 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 ZNF536O15090 1300 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 CHD7Q9P2D1 2997 aa10.99□□□□□ -0.65
VPS26B-207ENST00000532160 TSPY2A6NKD2 308 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 ORC4O43929 436 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 FGRP09769 529 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 DNAJB2P25686 324 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 CDK7P50613 346 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 STAT2P52630 851 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 GJA9P57773 515 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 SNAP25P60880 206 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 BEX3Q00994 111 aa10.98□□□□□ -0.65
VPS26B-207ENST00000532160 RNF20Q5VTR2 975 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms