RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PEAK1Q9H792 1746 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 FAM237AA0A1B0GTK4 181 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 FOXN1O15353 648 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 POLR3DP05423 398 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 RFC5P40937 340 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ITIH3Q06033 890 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 PPARAQ07869 468 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 BTG3Q14201 252 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 CMPK2Q5EBM0 449 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 OTUD7BQ6GQQ9 843 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 TMEM154Q6P9G4 183 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 SMCR8Q8TEV9 937 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 NEK1Q96PY6 1258 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 TRAPPC9Q96Q05 1148 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 HAUS4Q9H6D7 363 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 DMAP1Q9NPF5 467 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-219ENST00000531050 TUBGCP4Q9UGJ1 667 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 ARHGEF10O15013 1369 aa8.61□□□□□ -1.03
PTPRK-219ENST00000531050 E2F6O75461 281 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 PDHA1P08559 390 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 HERVK_113P62684 666 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ANO1Q5XXA6 986 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 LMNTD2Q8IXW0 634 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 SMYD1Q8NB12 490 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 FGD4Q96M96 766 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 USP44Q9H0E7 712 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 UNC45AQ9H3U1 944 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ESF1Q9H501 851 aaKnown RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 CNOT8Q9UFF9 292 aaKnown RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 CARMIL3Q8ND23 1372 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ORC4O43929 436 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 NDUFA10O95299 355 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 FDPSP14324 419 aaKnown RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 GNAZP19086 355 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 NCALDP61601 193 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 SEPT2Q15019 361 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ZNF827Q17R98 1081 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC197Q8NCU1 140 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 SPATA4Q8NEY3 305 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 CHP1Q99653 195 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 NCOA5Q9HCD5 579 aaKnown RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ECHDC1Q9NTX5 307 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 TMOD4Q9NZQ9 345 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 WDR37Q9Y2I8 494 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 EPN1Q9Y6I3 576 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ITIH6Q6UXX5 1313 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 WDR17Q8IZU2 1322 aa8.6□□□□□ -1.03
PTPRK-219ENST00000531050 ANO9A1A5B4 782 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 FAM200BP0CF97 657 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 ATP6V1C1P21283 382 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 FUT4P22083 530 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 CDC25AP30304 524 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 CUL4BQ13620 913 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 KRT32Q14532 448 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 KIAA0753Q2KHM9 967 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 FAM133BQ5BKY9 247 aaKnown RBP8.59□□□□□ -1.03
PTPRK-219ENST00000531050 USPL1Q5W0Q7 1092 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 CPLX4Q7Z7G2 160 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 ZNF589Q86UQ0 364 aaPredicted RBP8.59□□□□□ -1.03
PTPRK-219ENST00000531050 INCENPQ9NQS7 918 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 KRT16P08779 473 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 VIL1P09327 827 aaKnown RBP8.59□□□□□ -1.03
PTPRK-219ENST00000531050 CARSP49589 748 aaKnown RBP8.59□□□□□ -1.03
PTPRK-219ENST00000531050 SLC39A14Q15043 492 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC122Q5T0U0 273 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 AZIN2Q96A70 460 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 IWS1Q96ST2 819 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 DLGAP2Q9P1A6 1054 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 NFU1Q9UMS0 254 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 THRAP3Q9Y2W1 955 aaKnown RBP8.59□□□□□ -1.03
PTPRK-219ENST00000531050 NUB1Q9Y5A7 615 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 FMN2Q9NZ56 1722 aa8.59□□□□□ -1.03
PTPRK-219ENST00000531050 KIF28PB7ZC32 967 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 F8VZ95 297 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 IGF2BP3O00425 579 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 GFPT2O94808 682 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 UBTFL1P0CB47 393 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 RARAP10276 462 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 PCK1P35558 622 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 VAV2P52735 878 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 KLC1Q07866 573 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 CBX3Q13185 183 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 MORC3Q14149 939 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 RESP18Q5W5W9 173 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 EXOC3L1Q86VI1 746 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 KLHDC4Q8TBB5 520 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 CORO1BQ9BR76 489 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 MTA3Q9BTC8 594 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 GDF3Q9NR23 364 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 RHBDL2Q9NX52 303 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
PTPRK-219ENST00000531050 ZMYND8Q9ULU4 1186 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-219ENST00000531050 PLAAQ9Y263 795 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms