RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ZEB2O60315 1214 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 FDX1P10109 184 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 PTGS1P23219 599 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 GRB10Q13322 594 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 SBK1Q52WX2 424 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 RPAP2Q8IXW5 612 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 AMOTL1Q8IY63 956 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 A1CFQ9NQ94 594 aaKnown RBP19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 LMCD1Q9NZU5 365 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 ARPP21Q9UBL0 812 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 FEM1BQ9UK73 627 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 ZNF536O15090 1300 aa19.49■□□□□ 0.71
CHMP4A-203ENST00000527154 ZNF316A6NFI3 1004 aaPredicted RBP19.48■□□□□ 0.71
CHMP4A-203ENST00000527154 RFC2P35250 354 aa19.48■□□□□ 0.71
CHMP4A-203ENST00000527154 PSMC6P62333 389 aa19.48■□□□□ 0.71
CHMP4A-203ENST00000527154 IQSEC1Q6DN90 963 aa19.48■□□□□ 0.71
CHMP4A-203ENST00000527154 ALYREFQ86V81 257 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-203ENST00000527154 GMCL1P1Q8NEA9 526 aa19.48■□□□□ 0.71
CHMP4A-203ENST00000527154 FAM86C2PA6NEL3 165 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 PITPNM1O00562 1244 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 CHGBP05060 677 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 SUPT20HL2P0C7V6 817 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 RLBP1P12271 317 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 HERC6Q8IVU3 1022 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 AP5M1Q9H0R1 490 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 ACAD9Q9H845 621 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 CERS4Q9HA82 394 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 IL1RAPL2Q9NP60 686 aa19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 TRMT13Q9NUP7 481 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-203ENST00000527154 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 DYNC1LI2O43237 492 aaPredicted RBP19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 HSP90AB4PQ58FF6 505 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 TMEM63BQ5T3F8 832 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 KIFC2Q96AC6 838 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 PDGFCQ9NRA1 345 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 PAG1Q9NWQ8 432 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 SCN10AQ9Y5Y9 1956 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 TNKSO95271 1327 aa19.46■□□□□ 0.71
CHMP4A-203ENST00000527154 RAD21O60216 631 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 CYP2C9P11712 490 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 ACTN1P12814 892 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 PURAQ00577 322 aaKnown RBP19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 TKFCQ3LXA3 575 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 GIMAP6Q6P9H5 292 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 SPRED2Q7Z698 418 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 FAM178BQ8IXR5 827 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 CLASRPQ8N2M8 674 aaKnown RBP19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 ARNTL2Q8WYA1 636 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 PUS7LQ9H0K6 701 aaKnown RBP19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 SLC4A4Q9Y6R1 1079 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 SCN5AQ14524 2016 aa19.45■□□□□ 0.7
CHMP4A-203ENST00000527154 PLIN4Q96Q06 1357 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 COL4A4P53420 1690 aaPredicted RBP19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 WDFY4Q6ZS81 3184 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 BAIAP3O94812 1187 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 IQCF3P0C7M6 154 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 ATP5JP18859 108 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 DUSP28Q4G0W2 176 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 HAUS7Q99871 368 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 VTA1Q9NP79 307 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 MTMR4Q9NYA4 1195 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 CLIP2Q9UDT6 1046 aa19.44■□□□□ 0.7
CHMP4A-203ENST00000527154 TANC1Q9C0D5 1861 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 TET1Q8NFU7 2136 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 PLA2G6O60733 806 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 DEFB128Q7Z7B8 93 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 FBXO16Q8IX29 292 aaPredicted RBP19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 KIF1BPQ96EK5 621 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 KCNH6Q9H252 994 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 RNF146Q9NTX7 359 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 LCTP09848 1927 aa19.43■□□□□ 0.7
CHMP4A-203ENST00000527154 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 GSG1L2A8MUP6 293 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 MRE11P49959 708 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 LEXMQ3ZCV2 418 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 CEP95Q96GE4 821 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 STRBPQ96SI9 672 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 HOMER2Q9NSB8 354 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 POLR3EQ9NVU0 708 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 CYP39A1Q9NYL5 469 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 COG6Q9Y2V7 657 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 DDX49Q9Y6V7 483 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 PTPRSQ13332 1948 aa19.42■□□□□ 0.7
CHMP4A-203ENST00000527154 LOC102724159A0A0B4J2E5 919 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 KIF28PB7ZC32 967 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 BMP3P12645 472 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 GPNMBQ14956 572 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 PWP2Q15269 919 aaKnown RBP19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 NFRKBQ6P4R8 1299 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 ITPRIPQ8IWB1 547 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 GJD3Q8N144 294 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 UBE2ZQ9H832 354 aaPredicted RBP19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 CTDP1Q9Y5B0 961 aaPredicted RBP19.41■□□□□ 0.7
CHMP4A-203ENST00000527154 MYH4Q9Y623 1939 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms