RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
COLCA2-202ENST00000526216 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.24
COLCA2-202ENST00000526216 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.24
COLCA2-202ENST00000526216 C6orf50Q9HD87 102 aa16.52■□□□□ 0.24
COLCA2-202ENST00000526216 MYPNQ86TC9 1320 aa16.52■□□□□ 0.23
COLCA2-202ENST00000526216 FIBPO43427 364 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 PEX10O60683 326 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 TOMM70O94826 608 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 GNL2Q13823 731 aaKnown RBP16.51■□□□□ 0.23
COLCA2-202ENST00000526216 TMEM132BQ14DG7 1078 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 TBC1D5Q92609 795 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
COLCA2-202ENST00000526216 ZNF214Q9UL59 606 aaPredicted RBP16.51■□□□□ 0.23
COLCA2-202ENST00000526216 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 TLL2Q9Y6L7 1015 aa16.51■□□□□ 0.23
COLCA2-202ENST00000526216 MEIS2O14770 477 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 EDIL3O43854 480 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 ZBED4O75132 1171 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 CNMDO75829 334 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 ZBTB48P10074 688 aaPredicted RBP16.5■□□□□ 0.23
COLCA2-202ENST00000526216 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
COLCA2-202ENST00000526216 GNA11P29992 359 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 KRT85P78386 507 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 JAKMIP3Q5VZ66 844 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 PIK3AP1Q6ZUJ8 805 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
COLCA2-202ENST00000526216 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
COLCA2-202ENST00000526216 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 ABCB11O95342 1321 aa16.5■□□□□ 0.23
COLCA2-202ENST00000526216 RBBP6Q7Z6E9 1792 aaKnown RBP16.5■□□□□ 0.23
COLCA2-202ENST00000526216 CCL15-CCL14A0A0B4J2E2 113 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 FDX1P10109 184 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 NASPP49321 788 aaPredicted RBP16.49■□□□□ 0.23
COLCA2-202ENST00000526216 CCL15Q16663 113 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 MUM1L1Q5H9M0 696 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 REXO1Q8N1G1 1221 aaKnown RBP16.49■□□□□ 0.23
COLCA2-202ENST00000526216 LEO1Q8WVC0 666 aaPredicted RBP16.49■□□□□ 0.23
COLCA2-202ENST00000526216 CUL5Q93034 780 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
COLCA2-202ENST00000526216 PSTPIP2Q9H939 334 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 RTEL1Q9NZ71 1219 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 RIPK3Q9Y572 518 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 PCDHB6Q9Y5E3 794 aa16.49■□□□□ 0.23
COLCA2-202ENST00000526216 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 GADD45BO75293 160 aaPredicted RBP16.48■□□□□ 0.23
COLCA2-202ENST00000526216 SLC10A3P09131 477 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 GTF2A2P52657 109 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 CEBPZQ03701 1054 aaKnown RBP16.48■□□□□ 0.23
COLCA2-202ENST00000526216 PTPAQ15257 358 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 RGMBQ6NW40 437 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 PTPN18Q99952 460 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 RCOR1Q9UKL0 485 aa16.48■□□□□ 0.23
COLCA2-202ENST00000526216 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 FAM155AB1AL88 458 aaPredicted RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 NFIBO00712 420 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 ATP2A1O14983 1001 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 CETPP11597 493 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 ALAS1P13196 640 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 ZNF157P51786 506 aaPredicted RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 OAZ1P54368 228 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 HERVK_113P62684 666 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 INF2Q27J81 1249 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 ATL3Q6DD88 541 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 KRT25Q7Z3Z0 450 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 HOXC10Q9NYD6 342 aa16.47■□□□□ 0.23
COLCA2-202ENST00000526216 MRPL11Q9Y3B7 192 aaKnown RBP16.47■□□□□ 0.23
COLCA2-202ENST00000526216 CCDC194A0A1B0GVG4 234 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
COLCA2-202ENST00000526216 IRX3P78415 501 aaPredicted RBP16.46■□□□□ 0.23
COLCA2-202ENST00000526216 GHRHRQ02643 423 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 FSTL1Q12841 308 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 TRAF1Q13077 416 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 RILPL1Q5EBL4 403 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
COLCA2-202ENST00000526216 ANKRD23Q86SG2 305 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 LINC00301Q8NCQ3 95 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 R3HDMLQ9H3Y0 253 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.23
COLCA2-202ENST00000526216 MRVI1Q9Y6F6 885 aa16.46■□□□□ 0.23
COLCA2-202ENST00000526216 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
COLCA2-202ENST00000526216 PDHXO00330 501 aa16.45■□□□□ 0.22
COLCA2-202ENST00000526216 YEATS4O95619 227 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms