RNA–Protein interactions for RNA: ENST00000523841.5

CCDC25-210, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-210ENST00000523841 HIPK3Q9H422 1215 aa12.62□□□□□ -0.39
CCDC25-210ENST00000523841 SLC28A3Q9HAS3 691 aa12.62□□□□□ -0.39
CCDC25-210ENST00000523841 RIPK3Q9Y572 518 aa12.62□□□□□ -0.39
CCDC25-210ENST00000523841 MINDY4BA8MYZ0 360 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 FGBP02675 491 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 BMP3P12645 472 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 ZNF365Q70YC5 407 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 SIRT2Q8IXJ6 389 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 SLC43A3Q8NBI5 491 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 GMCL1Q96IK5 515 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 ASB2Q96Q27 587 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 AP5M1Q9H0R1 490 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 RAVER2Q9HCJ3 691 aaKnown RBP12.61□□□□□ -0.39
CCDC25-210ENST00000523841 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
CCDC25-210ENST00000523841 LRRC37A2A6NM11 1700 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 GBF1Q92538 1859 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 MYADML2A6NDP7 307 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 RNF113AO15541 343 aaKnown RBP12.6□□□□□ -0.39
CCDC25-210ENST00000523841 GPAA1O43292 621 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
CCDC25-210ENST00000523841 IQSEC1Q6DN90 963 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
CCDC25-210ENST00000523841 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 USP38Q8NB14 1042 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 CEP95Q96GE4 821 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 CCDC136Q96JN2 1154 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 KATNBL1Q9H079 304 aa12.6□□□□□ -0.39
CCDC25-210ENST00000523841 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
CCDC25-210ENST00000523841 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 SLC1A4P43007 532 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 SLC4A3P48751 1232 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 ITGA7Q13683 1181 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 SLFN13Q68D06 897 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 NEDD1Q8NHV4 660 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 STAG1Q8WVM7 1258 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 FGD4Q96M96 766 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 MPHOSPH6Q99547 160 aaKnown RBP12.59□□□□□ -0.39
CCDC25-210ENST00000523841 PPP1R12CQ9BZL4 782 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 PRDM12Q9H4Q4 367 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 A1CFQ9NQ94 594 aaKnown RBP12.59□□□□□ -0.39
CCDC25-210ENST00000523841 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 ADD3Q9UEY8 706 aaKnown RBP12.59□□□□□ -0.39
CCDC25-210ENST00000523841 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
CCDC25-210ENST00000523841 GNEQ9Y223 722 aaKnown RBP12.59□□□□□ -0.39
CCDC25-210ENST00000523841 PCDHA11Q9Y5I1 949 aa12.59□□□□□ -0.39
CCDC25-210ENST00000523841 TMEM232C9JQI7 657 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 CTAGE5O15320 804 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 ADCY6O43306 1168 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 APPP05067 770 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 COL9A1P20849 921 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
CCDC25-210ENST00000523841 IKQ13123 557 aaPredicted RBP12.58□□□□□ -0.4
CCDC25-210ENST00000523841 BRDTQ58F21 947 aaPredicted RBP12.58□□□□□ -0.4
CCDC25-210ENST00000523841 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 ADAMTS19Q8TE59 1207 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 CRBNQ96SW2 442 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 UHRF1Q96T88 793 aaPredicted RBP12.58□□□□□ -0.4
CCDC25-210ENST00000523841 BCL11AQ9H165 835 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 POLR3EQ9NVU0 708 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
CCDC25-210ENST00000523841 SLC4A7Q9Y6M7 1214 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 RAD50Q92878 1312 aa12.58□□□□□ -0.4
CCDC25-210ENST00000523841 REV3LO60673 3130 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 ERC2O15083 957 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 CYP2C18P33260 490 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 RFC2P35250 354 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 PBX2P40425 430 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 CPT1AP50416 773 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 RCSD1Q6JBY9 416 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 LRRC47Q8N1G4 583 aaKnown RBP12.57□□□□□ -0.4
CCDC25-210ENST00000523841 EXOC6Q8TAG9 804 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 NOC4LQ9BVI4 516 aaKnown RBP12.57□□□□□ -0.4
CCDC25-210ENST00000523841 C1QTNF1Q9BXJ1 281 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 NAPBQ9H115 298 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 ISY1Q9ULR0 285 aaKnown RBP12.57□□□□□ -0.4
CCDC25-210ENST00000523841 TTC41PQ6P2S7 1318 aa12.57□□□□□ -0.4
CCDC25-210ENST00000523841 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
CCDC25-210ENST00000523841 ACRP10323 421 aa12.56□□□□□ -0.4
CCDC25-210ENST00000523841 ACTN1P12814 892 aa12.56□□□□□ -0.4
CCDC25-210ENST00000523841 POU3F3P20264 500 aaPredicted RBP12.56□□□□□ -0.4
CCDC25-210ENST00000523841 IGFBP4P22692 258 aa12.56□□□□□ -0.4
CCDC25-210ENST00000523841 IFNL3Q8IZI9 196 aa12.56□□□□□ -0.4
CCDC25-210ENST00000523841 MORC4Q8TE76 937 aa12.56□□□□□ -0.4
CCDC25-210ENST00000523841 EPB41L4AQ9HCS5 686 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms