RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 HTRA3P83110 453 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 HYAL2Q12891 473 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 SART3Q15020 963 aaKnown RBP4.85□□□□□ -1.63
SKP1-209ENST00000522552 PLA2G4EQ3MJ16 856 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 MZT2BQ6NZ67 158 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 FKBP9P1Q75LS8 142 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 ANKLE2Q86XL3 938 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 SPATA5Q8NB90 893 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 SMC1BQ8NDV3 1235 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 PPP1R14AQ96A00 147 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 TTC14Q96N46 770 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 PNMA5Q96PV4 448 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 ZCCHC2Q9C0B9 1178 aaKnown RBP4.85□□□□□ -1.63
SKP1-209ENST00000522552 OSBPL5Q9H0X9 879 aaPredicted RBP4.85□□□□□ -1.63
SKP1-209ENST00000522552 APEX2Q9UBZ4 518 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 GPR52Q9Y2T5 361 aa4.85□□□□□ -1.63
SKP1-209ENST00000522552 BLACEA4D250 179 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 AP1G1O43747 822 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA12O60330 932 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 MYBP10242 640 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 RAG1P15918 1043 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 VCAM1P19320 739 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 CHKAP35790 457 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 GRK6P43250 576 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 KRT85P78386 507 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 DSG1Q02413 1049 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 ZNF267Q14586 743 aaPredicted RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 PDCD2Q16342 344 aaPredicted RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.84□□□□□ -1.637e-8■■■■■ 40
SKP1-209ENST00000522552 FAM133BQ5BKY9 247 aaKnown RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 RRP12Q5JTH9 1297 aaKnown RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 TTLL5Q6EMB2 1281 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 ZCCHC8Q6NZY4 707 aaKnown RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 PGM2L1Q6PCE3 622 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 KIF18BQ86Y91 864 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 NAXEQ8NCW5 288 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 GIMAP8Q8ND71 665 aaPredicted RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 MAGEB10Q96LZ2 347 aaPredicted RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 CCDC138Q96M89 665 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 PPM1MQ96MI6 270 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 TRERF1Q96PN7 1200 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 CENPOQ9BU64 300 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 CLEC4MQ9H2X3 399 aaPredicted RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 EMC7Q9NPA0 242 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA9Q9Y5G4 932 aaKnown RBP4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA8Q9Y5G5 932 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA7Q9Y5G6 932 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA6Q9Y5G7 932 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA3Q9Y5H0 932 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 PCDHGA2Q9Y5H1 932 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 GJA3Q9Y6H8 435 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 SLC4A7Q9Y6M7 1214 aa4.84□□□□□ -1.63
SKP1-209ENST00000522552 A0A1W2PNR3 127 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 hCG_1642624A0A1W2PR95 340 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 SPATA31C2B4DYI2 1134 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 B4E1Z4 1266 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PDE2AO00408 941 aaPredicted RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 ZBED1O96006 694 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 B3GALT4O96024 378 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 CFBP00751 764 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 RPN1P04843 607 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 HSD3B1P14060 373 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 POLR2BP30876 1174 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 SOX18P35713 384 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PTSQ03393 145 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 CCINQ13939 588 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 BBS9Q3SYG4 887 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 WIPI1Q5MNZ9 446 aaPredicted RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 TSHZ3Q63HK5 1081 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 SCARA3Q6AZY7 606 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 FAM180BQ6P0A1 224 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PPFIBP1Q86W92 1011 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 OR8H2Q8N162 312 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 ZNF513Q8N8E2 541 aaPredicted RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 PTPRN2Q92932 1015 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 GCC1Q96CN9 775 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 ISCA1Q9BUE6 129 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 EMILIN2Q9BXX0 1053 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 WDR12Q9GZL7 423 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 SMOC1Q9H4F8 434 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PDLIM7Q9NR12 457 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 RASSF1Q9NS23 344 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 C14orf119Q9NWQ9 140 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 SAMD15Q9P1V8 674 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 NXF1Q9UBU9 619 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 DIS3Q9Y2L1 958 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 LRRFIP2Q9Y608 721 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 WASHC2AQ641Q2 1341 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 A0A1B0GVC2 190 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 TERTO14746 1132 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 DDX3YO15523 660 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 DHX16O60231 1041 aaKnown RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 DLX3O60479 287 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PSAPP07602 524 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 PLCG1P19174 1290 aa4.83□□□□□ -1.64
SKP1-209ENST00000522552 RNF144AP50876 292 aaPredicted RBP4.83□□□□□ -1.64
SKP1-209ENST00000522552 FAPQ12884 760 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms