RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 DLATP10515 647 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 DNAJC21Q5F1R6 531 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 IFIH1Q9BYX4 1025 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 LRFN2Q9ULH4 789 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 HNRNPDLO14979 420 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 PDIA3P30101 505 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 PTGDRQ13258 359 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 ERCC6LQ2NKX8 1250 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 KIAA1468Q9P260 1216 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 SLC12A2P55011 1212 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 DYNLL1P63167 89 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 SARNPP82979 210 aaKnown RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 CFAP221Q4G0U5 840 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 SESTD1Q86VW0 696 aa17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
PCDHA3-201ENST00000522353 ARHGEF37A1IGU5 675 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 GSPT1P15170 499 aaKnown RBP17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 TMED8Q6PL24 325 aaPredicted RBP17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 CCDC127Q96BQ5 260 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 HAUS1Q96CS2 278 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 USP28Q96RU2 1077 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 ANKFY1Q9P2R3 1169 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 A6NNZ2 444 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 BRD1O95696 1058 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 PDE6CP51160 858 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 TUBB8Q3ZCM7 444 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 FBXO18Q8NFZ0 1043 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 U2AF1L4Q8WU68 220 aaKnown RBP17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 AMFRQ9UKV5 643 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 ASNSP08243 561 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 KCTD1Q719H9 257 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 OR8K1Q8NGG5 319 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 NARFQ9UHQ1 456 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 ZNF215Q9UL58 517 aaPredicted RBP17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 CCND2P30279 289 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 ADAM9Q13443 819 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 KRT81Q14533 505 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 SEPT14Q6ZU15 432 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 C2orf69Q8N8R5 385 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 AK8Q96MA6 479 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 PCDHA4Q9UN74 947 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 KCNJ18B7U540 433 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 STAM2O75886 525 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 BPIFB4P59827 614 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 KCNJ12Q14500 433 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 APOA5Q6Q788 366 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 VPS52Q8N1B4 723 aa17.85■□□□□ 0.45
PCDHA3-201ENST00000522353 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 HSPA1LP34931 641 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 INTS8Q75QN2 995 aaKnown RBP17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 ZFP91Q96JP5 570 aaPredicted RBP17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 INO80BQ9C086 356 aaPredicted RBP17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 KIAA1024Q9UPX6 916 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 C21orf2O43822 256 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 SYDE2Q5VT97 1194 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 RAB20Q9NX57 234 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 HECW2Q9P2P5 1572 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 GAP43P17677 238 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 PPM1KQ8N3J5 372 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 FOXP1Q9H334 677 aaPredicted RBP17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 MORC3Q14149 939 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 FYB2Q5VWT5 728 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 SCYL2Q6P3W7 929 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 AFG3L2Q9Y4W6 797 aa17.84■□□□□ 0.45
PCDHA3-201ENST00000522353 ZSCAN20P17040 1043 aaPredicted RBP17.83■□□□□ 0.45
PCDHA3-201ENST00000522353 SLF1Q9BQI6 1058 aa17.83■□□□□ 0.45
PCDHA3-201ENST00000522353 OGFRQ9NZT2 677 aa17.83■□□□□ 0.45
PCDHA3-201ENST00000522353 PTPREP23469 700 aa17.83■□□□□ 0.44
PCDHA3-201ENST00000522353 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCDHA3-201ENST00000522353 SLC27A3Q5K4L6 730 aa17.83■□□□□ 0.44
PCDHA3-201ENST00000522353 RUFY4Q6ZNE9 571 aa17.83■□□□□ 0.44
PCDHA3-201ENST00000522353 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
PCDHA3-201ENST00000522353 RNF8O76064 485 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 RSAD2Q8WXG1 361 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 TPD52P55327 224 aaPredicted RBP17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 MTX1Q13505 466 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 MICALL1Q8N3F8 863 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 APOL6Q9BWW8 343 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 METTL23Q86XA0 190 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 MRRFQ96E11 262 aaKnown RBP17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 PARP2Q9UGN5 583 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 TYW5A2RUC4 315 aaKnown RBP17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 GJA10Q969M2 543 aa17.82■□□□□ 0.44
PCDHA3-201ENST00000522353 RIOK3O14730 519 aaKnown RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 PFDN6O15212 129 aa17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 RPN1P04843 607 aaKnown RBP17.81■□□□□ 0.44
PCDHA3-201ENST00000522353 DIXDC1Q155Q3 683 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms