RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NAALADL2Q58DX5 795 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 RRAGBQ5VZM2 374 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 TRMT44Q8IYL2 757 aaKnown RBP29.25■■■□□ 2.27
COL13A1-214ENST00000522165 AGBL3Q8NEM8 1001 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.25■■■□□ 2.27
COL13A1-214ENST00000522165 EDIL3O43854 480 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 ZBTB7AO95365 584 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 ZNF18P17022 549 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 QRICH1Q2TAL8 776 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 DPF2Q92785 391 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 GMCL1Q96IK5 515 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 NAP1L5Q96NT1 182 aaPredicted RBP29.25■■■□□ 2.27
COL13A1-214ENST00000522165 ARFGEF1Q9Y6D6 1849 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 CD44P16070 742 aaKnown RBP29.24■■■□□ 2.27
COL13A1-214ENST00000522165 MRPL12P52815 198 aaKnown RBP29.24■■■□□ 2.27
COL13A1-214ENST00000522165 UBE2SQ16763 222 aa29.24■■■□□ 2.27
COL13A1-214ENST00000522165 TMC6Q7Z403 805 aa29.24■■■□□ 2.27
COL13A1-214ENST00000522165 POTEDQ86YR6 584 aa29.24■■■□□ 2.27
COL13A1-214ENST00000522165 CNTNAP1P78357 1384 aa29.24■■■□□ 2.27
COL13A1-214ENST00000522165 MTMR14Q8NCE2 650 aa29.24■■■□□ 2.27
COL13A1-214ENST00000522165 NDUFB10O96000 172 aa29.23■■■□□ 2.27
COL13A1-214ENST00000522165 RASSF8Q8NHQ8 419 aa29.23■■■□□ 2.27
COL13A1-214ENST00000522165 MTMR9Q96QG7 549 aa29.23■■■□□ 2.27
COL13A1-214ENST00000522165 PSTPIP2Q9H939 334 aa29.23■■■□□ 2.27
COL13A1-214ENST00000522165 PPP1R3GB7ZBB8 358 aa29.22■■■□□ 2.27
COL13A1-214ENST00000522165 CDC37Q16543 378 aaPredicted RBP29.22■■■□□ 2.27
COL13A1-214ENST00000522165 TNNI2P48788 182 aa29.22■■■□□ 2.27
COL13A1-214ENST00000522165 FKBP1CQ5VVH2 108 aa29.22■■■□□ 2.27
COL13A1-214ENST00000522165 CABP7Q86V35 215 aa29.22■■■□□ 2.27
COL13A1-214ENST00000522165 CXCL9Q07325 125 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 GLT8D2Q9H1C3 349 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 SYNPO2Q9UMS6 1093 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 TECP42680 631 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 CALCRLQ16602 461 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 DALRD3Q5D0E6 543 aaKnown RBP29.21■■■□□ 2.27
COL13A1-214ENST00000522165 SMYD4Q8IYR2 804 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-214ENST00000522165 IGSF22Q8N9C0 903 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 NUP88Q99567 741 aaPredicted RBP29.21■■■□□ 2.27
COL13A1-214ENST00000522165 PCDHA1Q9Y5I3 950 aa29.21■■■□□ 2.27
COL13A1-214ENST00000522165 SLC37A4O43826 429 aa29.2■■■□□ 2.26
COL13A1-214ENST00000522165 TDP2O95551 362 aa29.2■■■□□ 2.26
COL13A1-214ENST00000522165 RMND1Q9NWS8 449 aa29.2■■■□□ 2.26
COL13A1-214ENST00000522165 ATF5Q9Y2D1 282 aaPredicted RBP29.2■■■□□ 2.26
COL13A1-214ENST00000522165 A0A1W2PRG0 241 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 RPN1P04843 607 aaKnown RBP29.19■■■□□ 2.26
COL13A1-214ENST00000522165 SPATA1Q5VX52 437 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 KLHL10Q6JEL2 608 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 CUEDC2Q9H467 287 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 VEZTQ9HBM0 779 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 KBTBD4Q9NVX7 518 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 SYNRGQ9UMZ2 1314 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 MYL1P05976 194 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 CCZ1BP86790 482 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 CCZ1P86791 482 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-214ENST00000522165 HSP90AA4PQ58FG1 418 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 PPP4R3AQ6IN85 833 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 LRRC15Q8TF66 581 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 ZBED3Q96IU2 234 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-214ENST00000522165 PLIN2Q99541 437 aa29.19■■■□□ 2.26
COL13A1-214ENST00000522165 SAMSN1Q9NSI8 373 aaKnown RBP29.19■■■□□ 2.26
COL13A1-214ENST00000522165 R3HCC1Q9Y3T6 440 aaKnown RBP29.19■■■□□ 2.26
COL13A1-214ENST00000522165 BMP3P12645 472 aa29.18■■■□□ 2.26
COL13A1-214ENST00000522165 PLCG1P19174 1290 aa29.18■■■□□ 2.26
COL13A1-214ENST00000522165 CDK11BP21127 795 aaKnown RBP29.18■■■□□ 2.26
COL13A1-214ENST00000522165 POLD1P28340 1107 aa29.18■■■□□ 2.26
COL13A1-214ENST00000522165 TXKP42681 527 aa29.18■■■□□ 2.26
COL13A1-214ENST00000522165 CCDC150Q8NCX0 1101 aa29.18■■■□□ 2.26
COL13A1-214ENST00000522165 MAGEF1Q9HAY2 307 aa29.18■■■□□ 2.26
COL13A1-214ENST00000522165 FXR2P51116 673 aaKnown RBP eCLIP29.17■■■□□ 2.26
COL13A1-214ENST00000522165 DHX8Q14562 1220 aaKnown RBP29.17■■■□□ 2.26
COL13A1-214ENST00000522165 ZNF658Q5TYW1 1059 aaPredicted RBP29.17■■■□□ 2.26
COL13A1-214ENST00000522165 MMTAG2Q9BU76 263 aaKnown RBP29.17■■■□□ 2.26
COL13A1-214ENST00000522165 TAOK3Q9H2K8 898 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 INTS13Q9NVM9 706 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 SKILP12757 684 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 DNTTIP2Q5QJE6 756 aaKnown RBP29.17■■■□□ 2.26
COL13A1-214ENST00000522165 SYDE2Q5VT97 1194 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 BTNL9Q6UXG8 535 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 FAM83AQ86UY5 434 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 CCDC125Q86Z20 511 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 VSTM4Q8IW00 320 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 MTFR1LQ9H019 292 aa29.17■■■□□ 2.26
COL13A1-214ENST00000522165 TMEM232C9JQI7 657 aa29.16■■■□□ 2.26
COL13A1-214ENST00000522165 STX17P56962 302 aa29.16■■■□□ 2.26
COL13A1-214ENST00000522165 ARMCX5Q6P1M9 558 aa29.16■■■□□ 2.26
COL13A1-214ENST00000522165 FER1L6Q2WGJ9 1857 aa29.16■■■□□ 2.26
COL13A1-214ENST00000522165 CIAPIN1Q6FI81 312 aa29.16■■■□□ 2.26
COL13A1-214ENST00000522165 TMEM39BQ9GZU3 492 aa29.16■■■□□ 2.26
COL13A1-214ENST00000522165 TBC1D12O60347 775 aa29.15■■■□□ 2.26
COL13A1-214ENST00000522165 AMNQ9BXJ7 453 aa29.15■■■□□ 2.26
COL13A1-214ENST00000522165 ARHGEF10LQ9HCE6 1279 aa29.15■■■□□ 2.26
COL13A1-214ENST00000522165 BRCA1P38398 1863 aaKnown RBP29.15■■■□□ 2.26
COL13A1-214ENST00000522165 MYH7BA7E2Y1 1941 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L15C9J2P7 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L13C9JLJ4 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L11C9JVI0 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L18D6R9N7 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L22D6RA61 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L17D6RBQ6 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L19D6RCP7 530 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms