RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 PKD2L1Q9P0L9 805 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 NFIXQ14938 502 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 KRT31Q15323 416 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 SLC9C1Q4G0N8 1177 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 ASPRV1Q53RT3 343 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 CNOT6LQ96LI5 555 aaKnown RBP12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 MAGEF1Q9HAY2 307 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 PLCG1P19174 1290 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 SLC16A2P36021 539 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 PCDHA1Q9Y5I3 950 aa12.52□□□□□ -0.41
PCDHGB4-201ENST00000519479 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 HSF2BPO75031 334 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 CAPN2P17655 700 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 CCZ1BP86790 482 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 CERKLQ49MI3 558 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 HAUS4Q9H6D7 363 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 ARHGEF10LQ9HCE6 1279 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 PLSCR1O15162 318 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 TTLL1O95922 423 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 CFBP00751 764 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 GPBP1Q86WP2 473 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 SLC35F6Q8N357 371 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 P2RX5Q93086 422 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 EPB41P11171 864 aaKnown RBP12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 PRR16Q569H4 304 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 LARP4BQ92615 738 aaKnown RBP12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 PANX2Q96RD6 677 aa12.51□□□□□ -0.41
PCDHGB4-201ENST00000519479 KCTD1Q719H9 257 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 GRIN1Q05586 938 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 SLFN13Q68D06 897 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 STAG2Q8N3U4 1231 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 PHF20Q9BVI0 1012 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 WHAMMP3Q1A5X7 153 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 CDC23Q9UJX2 597 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 TEX33O43247 280 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 MYL1P05976 194 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 ATP2C1P98194 919 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 ICA1Q05084 483 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 PTPAQ15257 358 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 SLC15A2Q16348 729 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 FAM26FQ5R3K3 315 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 TOGARAM2Q6ZUX3 1019 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 TAX1BP1Q86VP1 789 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 IFT81Q8WYA0 676 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 NOX5Q96PH1 765 aa12.5□□□□□ -0.41
PCDHGB4-201ENST00000519479 NT5C2P49902 561 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 VAV2P52735 878 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 PANK4Q9NVE7 773 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 MFAP3LO75121 409 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 C12orf60Q5U649 245 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 FBXO38Q6PIJ6 1188 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 KLHL30Q0D2K2 578 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 ASIC2Q16515 512 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 CCDC17Q96LX7 622 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 FBXO33Q7Z6M2 555 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 RABGGTAQ92696 567 aa12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
PCDHGB4-201ENST00000519479 DBNDD1Q9H9R9 158 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms