RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 GNEQ9Y223 722 aaKnown RBP11.85□□□□□ -0.51
SH2D4A-202ENST00000518040 ASB14A6NK59 587 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 RAD21O60216 631 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 BAIAP3O94812 1187 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 OAZ1P54368 228 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 KRT40Q6A162 431 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 CLEC10AQ8IUN9 316 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 HERC6Q8IVU3 1022 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 FBXL18Q96ME1 805 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 KATNBL1Q9H079 304 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 UBE2ZQ9H832 354 aaPredicted RBP11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 RIPK3Q9Y572 518 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 ZNF536O15090 1300 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 GRIN2DO15399 1336 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 CDK8P49336 464 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 SSH3Q8TE77 659 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 SDR42E1Q8WUS8 393 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 DYNLL2Q96FJ2 89 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
SH2D4A-202ENST00000518040 DCXO43602 365 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 LPXNO60711 386 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 FDX1P10109 184 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 IQSEC1Q6DN90 963 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 C16orf86Q6ZW13 317 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 DEFB128Q7Z7B8 93 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 CPXCR1Q8N123 301 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 FGD4Q96M96 766 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 CCDC8Q9H0W5 538 aaPredicted RBP11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
SH2D4A-202ENST00000518040 ASTN1O14525 1302 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 TNKSO95271 1327 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 CYP2D6P10635 497 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 CHRM1P11229 460 aaPredicted RBP11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 PDE6AP16499 860 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 KCNJ6P48051 423 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 FOXK2Q01167 660 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 C12orf60Q5U649 245 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 TRMT2AQ8IZ69 625 aaKnown RBP11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 EAF2Q96CJ1 260 aaPredicted RBP11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 SLC38A10Q9HBR0 1119 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
SH2D4A-202ENST00000518040 ZNF532Q9HCE3 1301 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 USP17L12C9JPN9 530 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 USP17L21D6R901 530 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 FTOQ9C0B1 505 aaKnown RBP eCLIP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 MCM3APO60318 1980 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 F5H6K3 240 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 ST18O60284 1047 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 RARSP54136 660 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 PSMC6P62333 389 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 KLRC3Q07444 240 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 BFSP2Q13515 415 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 LRRFIP1Q32MZ4 808 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 PTCRAQ6ISU1 281 aaPredicted RBP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 LCORLQ8N3X6 602 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 NYAP2Q9P242 653 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 PRKAG3Q9UGI9 489 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 FEM1BQ9UK73 627 aa11.81□□□□□ -0.52
SH2D4A-202ENST00000518040 GRXCR2A6NFK2 248 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 IQCF3P0C7M6 154 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 CYP2C9P11712 490 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 SMPD1P17405 629 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 KCNA5P22460 613 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 ERC1Q8IUD2 1116 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 PRRX2Q99811 253 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 UPF3BQ9BZI7 483 aaKnown RBP11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 TRMT13Q9NUP7 481 aaKnown RBP11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 SYNPO2Q9UMS6 1093 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
SH2D4A-202ENST00000518040 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 CPT1AP50416 773 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms