RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 WDR19Q8NEZ3 1342 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 SYNRGQ9UMZ2 1314 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 SGSM2O43147 1006 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 ADCY6O43306 1168 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 PGK1P00558 417 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 CST5P28325 142 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 ADCYAP1R1P41586 468 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 MAGEA10P43363 369 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 RTP1P59025 263 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 PTH1RQ03431 593 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 CCSAPQ6IQ19 270 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 PNMA1Q8ND90 353 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 KLHDC9Q8NEP7 349 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 MORC4Q8TE76 937 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 RUFY2Q8WXA3 655 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 TSEN34Q9BSV6 310 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 KRT23Q9C075 422 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 UPF3AQ9H1J1 476 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 CNNM2Q9H8M5 875 aa10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 ZHX1Q9UKY1 873 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-209ENST00000506632 TNKSO95271 1327 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 LTBP2Q14767 1821 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 ASB14A6NK59 587 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 NFIBO00712 420 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 CYP21A2P08686 494 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 NKX3-2P78367 333 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 SEC23AQ15436 765 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 RNF180Q86T96 592 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 CLEC4DQ8WXI8 215 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 PNMA2Q9UL42 364 aa10.64□□□□□ -0.71
PDLIM5-209ENST00000506632 LOC102724159A0A0B4J2E5 919 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 A0A1W2PQ45 241 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 A0A1W2PQY0 241 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 MYADML2A6NDP7 307 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 CTAGE5O15320 804 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 GJA9P57773 515 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 BAATQ14032 418 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 PWP2Q15269 919 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 ASPRV1Q53RT3 343 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 NSMFQ6X4W1 530 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 MAP4K1Q92918 833 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 PURBQ96QR8 312 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 TAF6LQ9Y6J9 622 aa10.63□□□□□ -0.71
PDLIM5-209ENST00000506632 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 ACLYP53396 1101 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 IRX5P78411 483 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 KCNA10Q16322 511 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 TAPT1Q6NXT6 567 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 STOX1Q6ZVD7 989 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 UBAC1Q9BSL1 405 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 MAF1Q9H063 256 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 PDLIM7Q9NR12 457 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 GNEQ9Y223 722 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 DDX49Q9Y6V7 483 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-209ENST00000506632 E7EWF7 191 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 SOX1O00570 391 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 PARP1P09874 1014 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 EDNRBP24530 442 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 ALDH5A1P51649 535 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 TLE2Q04725 743 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 CDC37Q16543 378 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 LRIT3Q3SXY7 679 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 IFIT1BQ5T764 474 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 CENPQQ7L2Z9 268 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 ANKRD33Q7Z3H0 272 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 ADGRF4Q8IZF3 695 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 VTA1Q9NP79 307 aa10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-209ENST00000506632 ELP1O95163 1332 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 PTPDC1A2A3K4 754 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 C6orf222P0C671 652 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 SMPD1P17405 629 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 ANTXR2P58335 489 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 RPS6P62753 249 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 TRDNQ13061 729 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 QRICH1Q2TAL8 776 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 RNF207Q6ZRF8 634 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms