RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 TMEM199Q8N511 208 aa11.05□□□□□ -0.64
PTPN20-216ENST00000506080 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
PTPN20-216ENST00000506080 UHRF1Q96T88 793 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-216ENST00000506080 NKX2-4Q9H2Z4 354 aa11.05□□□□□ -0.64
PTPN20-216ENST00000506080 ELP1O95163 1332 aa11.05□□□□□ -0.64
PTPN20-216ENST00000506080 MUC3AQ02505 3323 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 A0A0U1RQG5 324 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 ARVCFO00192 962 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 IFIT2P09913 472 aaKnown RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 CST5P28325 142 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 CYP2C18P33260 490 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 ADD2P35612 726 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 MRPS5P82675 430 aaKnown RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 CCDC144BQ3MJ40 725 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 PSRC1Q6PGN9 363 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 CLASRPQ8N2M8 674 aaKnown RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 PCSK9Q8NBP7 692 aaKnown RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 DDX12PQ92771 950 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 SLF1Q9BQI6 1058 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 TEX13BQ9BXU2 312 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 BOLA2Q9H3K6 86 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-216ENST00000506080 MSRAQ9UJ68 235 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
PTPN20-216ENST00000506080 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
PTPN20-216ENST00000506080 GJA9P57773 515 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 RAB30Q15771 203 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 GNASQ5JWF2 1037 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPN20-216ENST00000506080 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTPN20-216ENST00000506080 RAVER2Q9HCJ3 691 aaKnown RBP11.03□□□□□ -0.64
PTPN20-216ENST00000506080 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 CXXC1Q9P0U4 656 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-216ENST00000506080 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-216ENST00000506080 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
PTPN20-216ENST00000506080 BEX3Q00994 111 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 ANKRD35Q8N283 1001 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 HERVK_113Q902F9 699 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 FGD4Q96M96 766 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.64
PTPN20-216ENST00000506080 ABHD16BQ9H3Z7 469 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 SLC28A3Q9HAS3 691 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 IL23AQ9NPF7 189 aa11.02□□□□□ -0.64
PTPN20-216ENST00000506080 YBX2Q9Y2T7 364 aaKnown RBP11.02□□□□□ -0.64
PTPN20-216ENST00000506080 UMODL1Q5DID0 1318 aa11.02□□□□□ -0.65
PTPN20-216ENST00000506080 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 F5H6K3 240 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 ZBED4O75132 1171 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 NDUFB10O96000 172 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 CD4P01730 458 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 FGBP02675 491 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 RABGGTBP53611 331 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 CCL23P55773 120 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 KLRC3Q07444 240 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 ARMCX2Q7L311 632 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 OTOP2Q7RTS6 562 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 KIF1BPQ96EK5 621 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 CTAGE5O15320 804 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 RASA1P20936 1047 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 PLA2G5P39877 138 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 CNTN2Q02246 1040 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 NOL8Q76FK4 1167 aaKnown RBP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 CCDC144CPQ8IYA2 1237 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 PANK1Q8TE04 598 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 WNT2BQ93097 391 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 FAM122AQ96E09 287 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 EPAS1Q99814 870 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 PUS7LQ9H0K6 701 aaKnown RBP11.01□□□□□ -0.65
PTPN20-216ENST00000506080 HIPK3Q9H422 1215 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 MKNK2Q9HBH9 465 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 HOMER2Q9NSB8 354 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 CLIP2Q9UDT6 1046 aa11.01□□□□□ -0.65
PTPN20-216ENST00000506080 MCM3APO60318 1980 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 ZBED9Q6R2W3 1325 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 ATP2A1O14983 1001 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 MYOGP15173 224 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 PTGS1P23219 599 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 TFF2Q03403 129 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 UBE3CQ15386 1083 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 C6orf132Q5T0Z8 1188 aa11□□□□□ -0.65
PTPN20-216ENST00000506080 CXCL17Q6UXB2 119 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms