RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 JAMLQ86YT9 394 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 C1QL4Q86Z23 238 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 BHLHE22Q8NFJ8 381 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 PPP1R14AQ96A00 147 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 TNFRSF12AQ9NP84 129 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 CD320Q9NPF0 282 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 AKT3Q9Y243 479 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 E9PSI1 815 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 TBX1O43435 398 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 KCNH1O95259 989 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 MED14OSP0DP75 135 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 GLDCP23378 1020 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 CFPP27918 469 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 VIPR1P32241 457 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 EPHB3P54753 998 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 DLG4P78352 724 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 AMPD2Q01433 879 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 LAPTM5Q13571 262 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 HLA-DQA1Q5Y7H0 255 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 RCSD1Q6JBY9 416 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 CYP2R1Q6VVX0 501 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 FAM178BQ8IXR5 827 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 HNRNPLLQ8WVV9 542 aaKnown RBP5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 KLHL14Q9P2G3 628 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 FBLN5Q9UBX5 448 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 SMG5Q9UPR3 1016 aaKnown RBP5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 EMC9Q9Y3B6 208 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 BACE2Q9Y5Z0 518 aa5.58□□□□□ -1.52
HMGB1P29-201ENST00000505659 TEX51A0A1B0GUA7 166 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 TCAF2A6NFQ2 919 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 C2orf71A6NGG8 1288 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 PEX10O60683 326 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 SRSF3P84103 164 aaKnown RBP5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 GRB10Q13322 594 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 NCAPHQ15003 741 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 RAB3GAP1Q15042 981 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 KCNA10Q16322 511 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 TNNI3KQ59H18 835 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 TMEM132EQ6IEE7 984 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 ANKLE2Q86XL3 938 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 CPNE8Q86YQ8 564 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 LRRC56Q8IYG6 542 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 CELF2-AS1Q8N7Q2 184 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 APBA2Q99767 749 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 MBD1Q9UIS9 605 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 HCFC2Q9Y5Z7 792 aa5.57□□□□□ -1.52
HMGB1P29-201ENST00000505659 A0A1W2PQ27 194 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 A0A1W2PQ64 194 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 A0A1W2PQC6 194 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 A0A1W2PQD8 194 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 DDAH1O94760 285 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 ARL4AP40617 200 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 SEPHS1P49903 392 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 LINC00310P59036 64 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 YBX1P67809 324 aaKnown RBP5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 CYP4F3Q08477 520 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 SCRN1Q12765 414 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 SSPNQ14714 243 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 EEF1DP3Q658K8 133 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 RPTNQ6XPR3 784 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 TMC6Q7Z403 805 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 BVESQ8NE79 360 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 BTN2A2Q8WVV5 523 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 MRGPRX3Q96LB0 322 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 CNTD2Q9H8S5 307 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 RXFP1Q9HBX9 757 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 GPRC5CQ9NQ84 441 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
HMGB1P29-201ENST00000505659 SUSD5O60279 629 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 PPP1R11O60927 126 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 SEMA7AO75326 666 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 GJB6O95452 261 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 TBC1D8O95759 1140 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 MPOP05164 745 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 L1CAMP32004 1257 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 CDR1P51861 262 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 SV2CQ496J9 727 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 BICRALQ6AI39 1079 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 GTF2IRD2BQ6EKJ0 949 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 SPOCD1Q6ZMY3 1216 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 LCNL1Q6ZST4 164 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 GTF2IRD2Q86UP8 949 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 ZNF227Q86WZ6 799 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 TRIM59Q8IWR1 403 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 ST7Q9NRC1 585 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 GULP1Q9UBP9 304 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 RWDD3Q9Y3V2 267 aa5.55□□□□□ -1.52
HMGB1P29-201ENST00000505659 BTBD11A6QL63 1104 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 ITGAVP06756 1048 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 DBHP09172 617 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 PLS3P13797 630 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 ZNF143P52747 638 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 ANKS3Q6ZW76 656 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 SLC43A3Q8NBI5 491 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 TOX2Q96NM4 488 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 289.5 ms